| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0518 |
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| Symbol | |
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| ID | 6178575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 585464 |
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| End bp | 586831 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680266 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001807231 |
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| Protein GI | 172059579 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.034328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.698536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACA ATCTCACTCA ACGGATGGCG CGCGTCGTCA AGACGCTGCG CGGCGAGGCC
CGGCTTACCG AGGCGAACAC CCAGGAAATG CTCCGCGAGG TGCGTCTCGC GCTGCTCGAG
GCCGACGTCG CGTTGCCGGT CGTCCGCGAA TTCATCGCCA AGGTCAAGGA AAAGGCGCTC
GGCGAGGAAG TGATCAGCAG CCTGTCGCCG GGTCAGGCGC TCGTCGGCGT GGTCCAGAAG
GAACTGACCG CCGTGATCGG CGGCGACTAC GAAGGCAAGG CCGCCGAGCT GAACCTCGCG
GTCACGCCGC CCGCCGTAAT CCTGATGGCG GGCCTGCAGG GCGCCGGCAA GACCACGACC
GTCGGCAAGC TCGCGAAGCT GCTGCGCGAG AAGCACAAGA AAAAGGTGCT GACGGTCTCG
TGCGACGTGT ATCGCCCGGC CGCCATCATG CAGTTGAAAA CGGTGAGCGA ACAGGTCGGC
GCCGATTTCT TCCCGTCCAC GCCGGACCAG AAGCCCGTCG ACATCGCGGT TGCGGCCGTC
GACTGGGCGA AGCGTCACTA CCATGACGTG CTGATCGTCG ACACGGCCGG CCGCCTCGGT
ATCGACGAGG CGATGATGCA GGAAATCGCC GCGTTGCACG GCACGCTGAA GCCGGCTGAA
ACGCTGTTCG TCGTCGACGC GATGCTCGGC CAGGACGCAG TCAACACCGC GAAGGCGTTC
AACGACACGC TGCCGCTCAC CGGCGTCGTG CTGACCAAGC TCGACGGCGA TTCGCGCGGC
GGTGCCGCGC TGTCGGTGCG CCACATCACG GGCAAGCCGA TCAAGTTCGT CGGTGTCGCC
GAAAAGCTCG ACGGCCTCGA GGTGTTCCAC CCGGACCGCA TGGCGAACCG GATCCTCGGC
ATGGGCGACA TCCTCGCGCT GGTCGAGGAA GCCCAGCGCG GCGTCGACGT GCAGGCCGCG
CAGAAGCTCG CCGACAAGGT GAAGAAAGGC GGCGACTTCG ACCTGAACGA TTTCCGCGCG
CAGATCTCGC AGATGAAAAA CATGGGCGGC CTGTCGTCGC TGATGGACAA GCTGCCCGCG
CAGTTCCAGC AGGCGGCGGC CGGCGCCGAC ATGGGCCAGG CCGAGAAGTC GATCCGCCGG
ATGGAAGGCA TCATCAGCTC GATGACGCCC GCCGAGCGCG CGAAACCCGA AATCATCAAG
GCGACGCGCA AGCGCCGCAT TGCAGCCGGC GCGGGCGTGC CGGTGCAGGA AGTCAACCGG
ATGCTGAACC AGTACGACCA GATGCGTACG ATGATGAAGA AGCTGAAGGG CGGCAACATG
CAGAAAATGA TGCGCGGCCT GAAGGGCATG ATGCCCGGCA TGCGCTGA
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| Protein sequence | MLDNLTQRMA RVVKTLRGEA RLTEANTQEM LREVRLALLE ADVALPVVRE FIAKVKEKAL
GEEVISSLSP GQALVGVVQK ELTAVIGGDY EGKAAELNLA VTPPAVILMA GLQGAGKTTT
VGKLAKLLRE KHKKKVLTVS CDVYRPAAIM QLKTVSEQVG ADFFPSTPDQ KPVDIAVAAV
DWAKRHYHDV LIVDTAGRLG IDEAMMQEIA ALHGTLKPAE TLFVVDAMLG QDAVNTAKAF
NDTLPLTGVV LTKLDGDSRG GAALSVRHIT GKPIKFVGVA EKLDGLEVFH PDRMANRILG
MGDILALVEE AQRGVDVQAA QKLADKVKKG GDFDLNDFRA QISQMKNMGG LSSLMDKLPA
QFQQAAAGAD MGQAEKSIRR MEGIISSMTP AERAKPEIIK ATRKRRIAAG AGVPVQEVNR
MLNQYDQMRT MMKKLKGGNM QKMMRGLKGM MPGMR
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