| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0515 |
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| Symbol | |
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| ID | 6178719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 582362 |
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| End bp | 584098 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680263 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001807228 |
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| Protein GI | 172059576 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.6472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.702798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTT CCCGTTTCTT TATCGGCACC CTCAAAGAAG CACCGGCCGA CGCAGAGATC
GTCAGCCACA AGCTGATGGT GCGCGCCGGC ATGATCCGTC GTGTCGCCGG CGGCATCTAT
AACTACCTGC CGGTCGGCCT GCGTTCGATT CGCAAGGTCG AAGCGATCGT GCGCGAGGAA
ATGAACCGGG CAGGCGCCAT CGAGCTGCTG ATGCCGGCCG TGCAGCCGGC CGAGCTGTGG
CAGGAGTCGG GCCGCTGGGA GCAGTACGGC CCCGAGCTGC TGCGCTTCAA GGACCGCAAG
GACAACGACT TCGTGATCGG GCCGACGCAC GAGGAAGTCG TTACCGACAT CGCGCGCAAC
CAGATCAAGA GCTACCGGCA GATGCCGGTG AACTTCTACC AGATCCAGAC GAAGTTCCGC
GACGAGATCC GTCCGCGCTT CGGCGTGATG CGCGGCCGCG AATTCATCAT GAAGGACGCG
TATTCGTTCG ACAAGGACAC GGCCGGCCTG AACGAGTCGT ATCGCAAGAT GTACGACGCG
TACGTGCGCA TCTTCACGCG CCTCGGCCTC GAGTTCCGGG CGGTCGCGGC CGACAGCGGC
TCGATCGGCG GCAACTTCTC GCACGAGTTC CACGTGATCG CCGATACCGG CGAGGACGCG
ATCGCCTATT GCCCGACGTC CGACTTCGCG GCGAACATCG AAGCGGCCGA GGCGCTGCCG
TTGATCGCCG CGCGTGCCGC GCCGGCCGAA GCGATGGAGA AGGTCGCGAC GCCGGGCAAG
GCGAAGTGCG AAGCGGTCGC CGAACTGCTG GCGATCCCGC TCGAGCGCAC GATCAAGTCG
ATCGTGCTCG CCACCGAGAA CGAAGGCGCC GAGCCGACCA TCTGGCTCAT CATGCTGCGC
GGCGACCACG ATCTGAACGA GATCAAGGTA TCGAAGCTGC CGGGGCTGAA GAACCACCGC
TTCGCGACCG AGCAGGAAAT CGTCGACTGG TTCGGCACGC CGCCGGGCTA TCTCGGCCCG
GTCGGCACGA AGAAGCCGGT GAAGGTGATC GCCGATCGCA CGGTCGCGAA CATGAGCGAC
TTCGTCGTCG GCGCGAACGA GGTCGACTAT CACATCGCGG GCGTGAACTG GGGCCGCGAC
CTGCCGGAAC CGGAAGTCGC CGATGTGCGC GACGTGAAGA AGGGCGATCC GTCGCCGGAC
GGCAAGGGCA CGATCGACAT CTGCCGCGGC ATCGAAGTCG GTCACGTGTT CCAGCTCGGC
ACCAAGTATT CGGAAGCGAT GGGCGCGACG TTCCTCGATG AATCGGGCAA GCCGCAGCCG
ATGCTGATGG GCTGCTACGG CGTCGGCGTC ACGCGGATTC TCGGCGCGGC GATCGAACAG
AACTTCGACG ACCGCGGCAT CATCTGGCCC GAGTCGATCG CGCCGTTCGA GGTCGTGCTG
TGCCCGATGG GCTACGATCG CAGCGACATG GTCCGCGAGG CCGCCGACAA GCTGTACGCG
GAACTGGCCG CCGCCGGCAT CGACGTGATC CTCGACGATC GCGGCGAGCG CCCGGGCGTG
ATGTTCGCCG ACTGGGAACT GATCGGCGTG CCGCATCGCC TGGTGATCGG CGAGCGCGGC
CTGAAGGAAG GCAAGATCGA GTACCAGGGC CGCCGCGACG CGGAGGCGAC GCTGCTGCCG
GCGGACGAGG CTGCGGCGAC GGTGACGGAG AAGATCCGCG CCGCGCTCGC GCACTAA
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| Protein sequence | MKASRFFIGT LKEAPADAEI VSHKLMVRAG MIRRVAGGIY NYLPVGLRSI RKVEAIVREE
MNRAGAIELL MPAVQPAELW QESGRWEQYG PELLRFKDRK DNDFVIGPTH EEVVTDIARN
QIKSYRQMPV NFYQIQTKFR DEIRPRFGVM RGREFIMKDA YSFDKDTAGL NESYRKMYDA
YVRIFTRLGL EFRAVAADSG SIGGNFSHEF HVIADTGEDA IAYCPTSDFA ANIEAAEALP
LIAARAAPAE AMEKVATPGK AKCEAVAELL AIPLERTIKS IVLATENEGA EPTIWLIMLR
GDHDLNEIKV SKLPGLKNHR FATEQEIVDW FGTPPGYLGP VGTKKPVKVI ADRTVANMSD
FVVGANEVDY HIAGVNWGRD LPEPEVADVR DVKKGDPSPD GKGTIDICRG IEVGHVFQLG
TKYSEAMGAT FLDESGKPQP MLMGCYGVGV TRILGAAIEQ NFDDRGIIWP ESIAPFEVVL
CPMGYDRSDM VREAADKLYA ELAAAGIDVI LDDRGERPGV MFADWELIGV PHRLVIGERG
LKEGKIEYQG RRDAEATLLP ADEAAATVTE KIRAALAH
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