| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0508 |
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| Symbol | |
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| ID | 6176822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 576440 |
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| End bp | 577435 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680256 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001807221 |
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| Protein GI | 172059569 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000945867 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.644632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCGT CCACCGCCTC CCCCACCCTC AGCGCCGCCC ACCTGCTCGC CCCGATCACA
AGCGACATGG AGCAGGTGAA TCGCGTTATC CGGCAAAGCC TCGCGTCCGA CGTGCTGCTG
ATCAACCAGA TCGCCGAGTA CATCATCGGC GCGGGCGGCA AGCGGCTGCG TCCGGCCCTG
CTGTTGCTCG TCGCTGGCGC GCTCGGCGAG ACGTCGCACC AGCGGCACGT GCTGGCCGCC
GTCGTCGAGT TCATCCACAC GGCCACGCTG CTGCATGACG ACGTCGTCGA CGAATCCGAG
CTGCGGCGCG GCCGCCAGAC GGCCAACGCG CTGTTCGGCA ACGCGGCGAG CGTACTGGTG
GGCGACTACC TGTATTCGCG CTCGTTCGAG ATGATGGTCG GCGTCGGCAA GATGCGCGTG
ATGGAAATCC TGTCGGAAGC GACGACGATC ATTTCCGAAG GCGAGGTGCT GCAGTTGCTG
AACATGCACG ACGCGGACGT CGACGAGACC CGCTACATGC AGGTGATCCG CTACAAGACG
GCGAAGCTGT TCGAAGCATC GGCCCGCCTC GGCGCGGTGC TCGCGGGCGC CGATGCGCCG
ACCGAAGCCG CCGCGGCCGA ATATGGCCGC CGGATCGGCA CCGCTTTCCA GATCATGGAC
GACTGGCTCG ACTACGCGGG CACGGCCGAA GCGATGGGCA AGAATGCCGG CGACGACCTG
CGCGAAGGGA AGCCGACGCT GCCGCTCATC TATCTGATCG AACGCGGCAC GCCCGAACAG
TCGGCGCTCG CACGCGAGGC GATCGAACAA GGCGGCACCG ATCGCTTCGA CACGATTTTC
GATGCGATCA CGCGCTCGGG CGCGCTCGAC CATACGCTCG AATGCGCGCG CCAGGAAGCA
CAGGCCGCCG CTGCCGCGAT CACTGCGTTC CCGGATTCGA TCTACAAGGA AAGCCTGCTT
GCGTTGTGCT CGTACTCGAC GTCGCGGCAG TCGTAA
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| Protein sequence | MSSSTASPTL SAAHLLAPIT SDMEQVNRVI RQSLASDVLL INQIAEYIIG AGGKRLRPAL
LLLVAGALGE TSHQRHVLAA VVEFIHTATL LHDDVVDESE LRRGRQTANA LFGNAASVLV
GDYLYSRSFE MMVGVGKMRV MEILSEATTI ISEGEVLQLL NMHDADVDET RYMQVIRYKT
AKLFEASARL GAVLAGADAP TEAAAAEYGR RIGTAFQIMD DWLDYAGTAE AMGKNAGDDL
REGKPTLPLI YLIERGTPEQ SALAREAIEQ GGTDRFDTIF DAITRSGALD HTLECARQEA
QAAAAAITAF PDSIYKESLL ALCSYSTSRQ S
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