| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0506 |
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| Symbol | |
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| ID | 6177030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 573418 |
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| End bp | 574662 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641680253 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001807219 |
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| Protein GI | 172059567 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0103937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.707083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGGC CACCTGCCCC CACCGACGCA TCGCCCGCCG ACCCACCCCA TTCGCTCGAT
GCGGCGCAAC TCGACGACTC GCCCGCCGTA CGGCTGCTGA CCGACACGCT GCACGCCGCC
CGCGTGCGCG ACGCGTCCGA CATCCACGTC GAACCATTCG AAGCAGACTG GCGCATTCGC
GTGCGCATCG ACGGCGTCCT GCATGAACTC GCGCGACCGC CCGTCCATCT GCGCGACGCG
CTCGTGACGC GGATCAAGGT GCTCGCACGC ATGGACATCG CCGAGCGCCG GCTTCCGCAG
GACGGCCGGC TGCGCATCAC GGTCGACGCA GGGCTGCGAG GCGATTACCG GGTCAGTTCG
CTGCCCACGC TGTTCGGCGA GAAACTCGTG TTGCGCCGCC TCGAAACACT GCCGCCCGAC
CTCACGCTCG CGCGCCTCGG CTTCGACGCG CGGCAGGCCG CGGCGATGGA GGCCGCGATA
CGCGCGCCGC ACGGTCTCGT GCTCGTCACC GGTCCGACCG GCAGCGGCAA GACGCTGTCG
CTCTATTGCG CGCTGCAGAT GCTCGATCGC GACGCGCACA ACGTATGCAC GGTCGAGGAT
CCGGCCGAGA TTCAGCTCGA CGGCATCAAC CAGGTCGGGG TGGTGGAGAA AGCCGGGCTG
ACCTTCGCCA CGGCGCTGCG CGCGCTGCTG CGGCAGGATC CGGACGTCAT CATGGTCGGC
GAGATTCGCG ACGCGGAGAC GGCCGACGTT GCGATCAAGG CCGCGCAGAC GGGGCACCTC
GTGCTGTCGA CGCTGCATAC GAACGACGCG CCGGCCGCTG TCGCGCGGCT GCTCGATATC
GGCGTCGCGC CGTACAACCT GGCCGCCGCG TTGCGCCTCG TCACCGCGCA GCGGCTCGTT
CGGCGTCTGT GCGTGAGCTG CCGCACGCGT TCGGACGCGC CGGCGCACGC GCTGCGCGAT
GCGGGCTGCG ATCCGGCGGC ACTGGCATCC GGATGGCGCC CGTTCGTCGC ACGCGGCTGT
GCCGCCTGTC ACGGTATCGG TTATCGAGGC CGCATCGGCC TGCATCAGAC GATGCCGGTT
TCGCCGGAGA TGGCCGACCG CATCGTCGCG CGCGCAAGCG TCGGTGCGCT CACGCAATGC
GCGGCGGCCG AAGGCGTGTG CAGTCTGCGC GACGCGGCAC TCGCGCACGT TCGCGACGGC
ACGACGAGCG TCGCGGAAGC CCTGGCCGCG ACACCCGACG CGTGA
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| Protein sequence | MQRPPAPTDA SPADPPHSLD AAQLDDSPAV RLLTDTLHAA RVRDASDIHV EPFEADWRIR
VRIDGVLHEL ARPPVHLRDA LVTRIKVLAR MDIAERRLPQ DGRLRITVDA GLRGDYRVSS
LPTLFGEKLV LRRLETLPPD LTLARLGFDA RQAAAMEAAI RAPHGLVLVT GPTGSGKTLS
LYCALQMLDR DAHNVCTVED PAEIQLDGIN QVGVVEKAGL TFATALRALL RQDPDVIMVG
EIRDAETADV AIKAAQTGHL VLSTLHTNDA PAAVARLLDI GVAPYNLAAA LRLVTAQRLV
RRLCVSCRTR SDAPAHALRD AGCDPAALAS GWRPFVARGC AACHGIGYRG RIGLHQTMPV
SPEMADRIVA RASVGALTQC AAAEGVCSLR DAALAHVRDG TTSVAEALAA TPDA
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