| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0505 |
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| Symbol | |
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| ID | 6177564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 572207 |
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| End bp | 573412 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641680252 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001807218 |
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| Protein GI | 172059566 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.23347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.637616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCGC CGCCTCACGA AACCCGCTTC GCGTGGCGCG GCCGTCGTCG CGACGGCACG
CCGTGCCGCG GCAACGTCAT CGCATTCGAT GCAGCCGCCG CACGTGCGGC GCTCGCGCGC
GACGGCGTCG CGGTGCTGTC GCTCGATGTC CGCGGCACGG CCCGGCCGCC GGCGGCCGGC
GCACGCGAGG TCACGCGCTT CACGCGCCAG CTCGCGAGCC TGCTGCAAGC CGGTCTGCCG
CTTGCACCAT CGCTCGAGAT GCTCGCCCGC ACCCGCACGC GCGACGGGGT CCCGCGCATC
GCCGCAGGTC TCGCGCGCGA GATCGTCGGC GGCCAGCGCT TCGCCGCCGC GCTGGCACGC
TATCCGTCCC AGTTCGGCAC GCTGTATCGC CAGTTGATCG AGGTCGGCGA AGCATCGGGT
GCGCTCGGCA CCGTGCTGAC CCGCGTCGCG GAGCACCGCG AACGCGCCGA CGCGCAATGG
CGCAAGCTGT GTGCCGCGCT CGCGTACCCG GTCGCCGTCA TCGTGTTCGC GCTGGCGATC
TCGGCCGCGC TGATGGTGTG GGTCGTGCCA ACGTTCCGGC AGATCTTCGA CGGCTTCGGC
GCAGCACTGC CGGCGCCGAC CCGCGCGCTG CTCGCTCTGT CCTCCGCGAC ATCGGCGTGG
GGCGGCACGT TCGTCGCCGG CGCCGCGGTG GCGGGGCTCG TCGCACGCCA CGCGCTGCGG
CGCTCGCCGT CGCTGCGCTA CACGGCCGCG CGGCACGTGC TGAATGCGCC GTTGGTCGGC
AGCGCGCTCA CGCGGTTCGC GGCCGCGCGC TGGTGCCGCT CGCTTGCCAC GCTGCTCAGC
GCCGGCGTAC CGCTCGCCGA TGCATTCGCC ACGCTCGAAC GCACGGCCGG CCACCCGGTG
TTCGAGCAGG CCACCGCGCA AATCGCCGCG CGCGTGCTGC GCGGCGCGCG TCTTGCCGAT
GCGATGCACG CGGCAGGCTG CTTCCCGGAC GACGTGGTAC AGCCGATCGC CGTCGCCGAG
GAAACCGGCG CACTCGACAC GATGCTCGCC GACATCGCCG CGCTCTGCGA GCGTCAGCTC
GACGCGCGTC TCGATGCGCT CGCCGCGCTC GGCGAGCCGC TGATCGTGAT CGTGCTGGGC
GCACTCGTCG GCGGCCTCGT GATCGCGATG TATCTGCCCA TCCTTCAGCT GGGCAACGTG
GTGTAG
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| Protein sequence | MHAPPHETRF AWRGRRRDGT PCRGNVIAFD AAAARAALAR DGVAVLSLDV RGTARPPAAG
AREVTRFTRQ LASLLQAGLP LAPSLEMLAR TRTRDGVPRI AAGLAREIVG GQRFAAALAR
YPSQFGTLYR QLIEVGEASG ALGTVLTRVA EHRERADAQW RKLCAALAYP VAVIVFALAI
SAALMVWVVP TFRQIFDGFG AALPAPTRAL LALSSATSAW GGTFVAGAAV AGLVARHALR
RSPSLRYTAA RHVLNAPLVG SALTRFAAAR WCRSLATLLS AGVPLADAFA TLERTAGHPV
FEQATAQIAA RVLRGARLAD AMHAAGCFPD DVVQPIAVAE ETGALDTMLA DIAALCERQL
DARLDALAAL GEPLIVIVLG ALVGGLVIAM YLPILQLGNV V
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