Gene BamMC406_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0500 
Symbol 
ID6177787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp568945 
End bp569403 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content68% 
IMG OID641680247 
ProductNUDIX hydrolase 
Protein accessionYP_001807213 
Protein GI172059561 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.43555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG ATTCCGCAGT GGGCGCCGTG CGCGCGCCCG ACGGCCGCAA GGTGACGGAA 
GTCGCGGTCG GCGTGATGGT ACAGCCCGGC GATGCGGTCG GCCGTTGCCG CTACCTGCTT
GCGCAGCGGC TGCAGGGCAA GCCGTACGAA GGCTACTGGG AGTTCCCGGG CGGCAAGCTG
GAAGCCGGCG AGAGCGTCGA GGATGCGCTG GCGCGCGAGC TGCACGAGGA ACTTGGCATC
GTCGTTACCG CCAGCCATCG CTGGCATACG CTCGAGCACG ACTATCCGCA CGCGTACGTG
CGGCTCTATT TCTGCAAGGT GACGGGCTGG ACGGGCGAGC CGCACAGCAA GGAAGGCCAG
GCGTTCGTGT GGCAGCAACT GCCGGTCGAC GTCGCGCCGC TGTTGCCGGC GGCGCTGCCG
GTGCTGGAAT TGCTCGAGAA GGAAGCGGCG TCGCAATGA
 
Protein sequence
MSTDSAVGAV RAPDGRKVTE VAVGVMVQPG DAVGRCRYLL AQRLQGKPYE GYWEFPGGKL 
EAGESVEDAL ARELHEELGI VVTASHRWHT LEHDYPHAYV RLYFCKVTGW TGEPHSKEGQ
AFVWQQLPVD VAPLLPAALP VLELLEKEAA SQ