Gene BamMC406_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0495 
SymbollpxC 
ID6178142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp562136 
End bp563053 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content64% 
IMG OID641680242 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionYP_001807208 
Protein GI172059556 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000405004 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC AGCGCACCAT CAAATCGATC GTGAAGACCG TGGGTATCGG TCTCCACTCG 
GGCCGCAAGA TTGAACTGAC GCTCCGTCCC GCCGCGCCGG GCACGGGCAT CGTCTTCTCG
CGCATCGACC TGCCTACGCC CGTCGACATT CCCGCATCGG CGATGTCGAT CGGCGACACG
CGGCTCGCGT CGGTGCTGCA GAAGGATGGT GCGCGCGTGT CGACGGTCGA GCACCTGATG
TCGGCATGCG CTGGCCTCGG CATCGACAAC CTCTATGTCG ACGTGACGGC CGAGGAAATC
CCGATCATGG ACGGCAGCGC GGCGACCTTC GTGTTCCTGA TCCAGTCCGC CGGCATCGAG
GAGCAGAACG CGCCGAAGCG CTTCATCAAG GTGACGAAGC CGGTTGAAAT CCGCGACGGC
GACAAGTTCG CGCGTCTCGA TCCGTATTTC GGTTTCAAGC TGAAGTTCTC GATCGACTTC
CGCCACCCGG CCGTCGACAA GACGGGCCAG GAGCTCGAGG TCGACTTCGC GAATACGTCG
TACGTGCGCG AGATCGCACG CGCGCGTACG TTCGGCTTCG CGCATGAAGC CGAGATGCTG
CGCGAGCTGG GCCTGGCGCG CGGCGGCAGC ATGGACAACG CGATCGTGCT CGACGAGTAC
CGGATCCTGA ACAACGACGG GCTGCGCTAT GACGACGAGT TCGTGAAGCA CAAGATGCTC
GACGCGATCG GCGACCTGTA CGTGGTCGGC CATCCGCTGC TGGCGTCGTA CACGGCATAC
AAGTCGGGTC ACGGGCTGAA CAACGCGCTG CTGCGCGAGC TGCTTGCCCA CGAAGACGCG
TACGAGATCG TCACGTTTGA CGATCCGCAG GCCGCGCCGA AAGGATTTGC ATTCGACGCG
CAGACGGCCT TCGCCTGA
 
Protein sequence
MLKQRTIKSI VKTVGIGLHS GRKIELTLRP AAPGTGIVFS RIDLPTPVDI PASAMSIGDT 
RLASVLQKDG ARVSTVEHLM SACAGLGIDN LYVDVTAEEI PIMDGSAATF VFLIQSAGIE
EQNAPKRFIK VTKPVEIRDG DKFARLDPYF GFKLKFSIDF RHPAVDKTGQ ELEVDFANTS
YVREIARART FGFAHEAEML RELGLARGGS MDNAIVLDEY RILNNDGLRY DDEFVKHKML
DAIGDLYVVG HPLLASYTAY KSGHGLNNAL LRELLAHEDA YEIVTFDDPQ AAPKGFAFDA
QTAFA