Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0489 |
Symbol | murC |
ID | 6177887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 555440 |
End bp | 556837 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641680236 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_001807202 |
Protein GI | 172059550 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.455446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA TCGTCAAACA GATTCATTTC GTCGGGATCG GCGGCGCGGG CATGAGCGGC ATCGCCGAAG TGCTCGTCAA TCTCGGCTAC GAGGTCAGCG GCTCGGACCT GTCGCGCAAC GCGGTGACCG ATCGCCTCGA GGCGCTCGGC GCGCGGATCG CGATCGGTCA CGATGCAGCG AACATCGCGG GCGCGAACGC GGTCGTCGTG TCGACGGCCG TGCGCTCCGA CAATCCCGAA GTACTGGCCG CACGGCACCA AGGTGTGCCG ATCGTGCAGC GCGCGGTGAT GCTCGCGGAG CTGATGCGCC TGAAGCAGGG GATCGCGATT GCCGGCACGC ACGGCAAGAC CACGACGACG AGCCTCGTCG CGAGCGTGCT CGCGGCGGGC GGCCTCGATC CGACCTTCGT GATCGGCGGC CGGCTGATCA GCGCCGGCGC GAACGCCCGG CTCGGCACGG GCGACTTCAT CGTCGCCGAG GCCGACGAGT CGGACGCGTC GTTCCTGAAC CTGTATCCGG TGATCGAAGT CATCACGAAC ATCGACGCCG ACCACATGGA CACCTACGGC CACGATTTCG CGCGGCTCAA GCAGGCGTTC ATCGAGTTCA CGCAGCGCCT GCCGTTCTAC GGCAGCGCGG TCGTGTGCGT CGACGATCCG AACGTGCGGC AGATCATCCC GTTCATCTCG AAGCCGGTCG TGCGCTACGG CCTGTCGCCG GATGCGCAGG TGCGCGCGGA AGACATCGAC GCGCGCGACG GCCGCATGCA CTTCACGGTG ATCCGCGAAG GTCGTGCGCC GCTCGCGGTG GTGCTGAACC TGCCGGGCCT GCACAACGTG CAGAACGCGC TCGCGGCGAT CGCGATCGCG ACCGATCTCG GCGTGTCGGA CGACGCGATC CAGCAGGCGC TGGCGGAATT CAACGGCGTC GGCCGGCGCT TCCAGCGCTA CGGCGAGGTG CCGAGCGCGG ACGGCGGCCA GTACACGCTG ATCGACGACT ACGGCCACCA CCCGGTCGAG ATGGCCGCGA CGGTCGCGGC CGCGCGCGGC GCGTTTCCGG GCCGCCGCCT CGTGCTGGCG TTCCAGCCGC ACCGCTATAC GCGCACGCGC GACTGCTTCG ACGACTTCGT CAACGTGCTG TCGACGGTCG ACGCGCTGGT GCTGACGGAA GTCTATGCCG CGGGCGAAGC GGCGATCGCG ACGGCCAACG GCGACGCGCT GTCGCGCGCG CTGCGTGCGG TGGGGAAGGT CGACCCGGTG TTCGTCGCGT CGGTCGACGA CGTGCCGGAC GCACTGGCGG GGGTCGCTCG GAACGGCGAC GTGGTGATCA CGATGGGCGC GGGTTCGATC GGCGGCGTGC CGGCGAAGAT CGTGCAGAAC ACGCAACAGA AGGAATGA
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Protein sequence | MKHIVKQIHF VGIGGAGMSG IAEVLVNLGY EVSGSDLSRN AVTDRLEALG ARIAIGHDAA NIAGANAVVV STAVRSDNPE VLAARHQGVP IVQRAVMLAE LMRLKQGIAI AGTHGKTTTT SLVASVLAAG GLDPTFVIGG RLISAGANAR LGTGDFIVAE ADESDASFLN LYPVIEVITN IDADHMDTYG HDFARLKQAF IEFTQRLPFY GSAVVCVDDP NVRQIIPFIS KPVVRYGLSP DAQVRAEDID ARDGRMHFTV IREGRAPLAV VLNLPGLHNV QNALAAIAIA TDLGVSDDAI QQALAEFNGV GRRFQRYGEV PSADGGQYTL IDDYGHHPVE MAATVAAARG AFPGRRLVLA FQPHRYTRTR DCFDDFVNVL STVDALVLTE VYAAGEAAIA TANGDALSRA LRAVGKVDPV FVASVDDVPD ALAGVARNGD VVITMGAGSI GGVPAKIVQN TQQKE
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