| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0486 |
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| Symbol | murD |
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| ID | 6178483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 551555 |
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| End bp | 553063 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641680233 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001807199 |
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| Protein GI | 172059547 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.358963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGAG ATCGGCAGCG GCCGATGGTG CTCGTACTGG GGCTCGGGGA ATCGGGCCTC
GCGATCGCGC GATGGTGCGC GAGGCACGGG TGCCGGCTGC GTATTGCCGA TACCCGCGAG
GCGCCGCCGA ACCTTGCCGC GCTGCAGGCC GAAGGCATCG ATGCCGAGTT CGTCGGCGGG
CCGTTCACGC CCTCGCTGCT CGACGGCGGC GTCGAGATCG TCGGCCTGAG CCCTGGCCTG
TCGCCGCTCG AACCGGCGCT CGCCGCGCTG ATCGCGGCCG CGAACGAGCG CGCGATCGCG
GTGTGGGGCG AGCTCGAATT CTTCGCGCAG GCGCTGCGCG CGCTTGGCAC GAGCGGCTAC
CAGCCGAAGG TGCTCGCGAT CACCGGCACC AACGGCAAGA CCACGACGAC GAACCTCACG
GGCCTGCTGT GCCAGCGTTC GGGCAAGAAA GTCGCCGTCG CCGGCAACAT CAGCCCGGCG
ATGCTCGACC GGCTCGCGCG CGCGATCGAC GAGACGGCGC TGCCCGACGT CTGGGTGCTC
GAACTGTCGA GCTTCCAGCT CGAGACGGCG CGCACGTTCG CGCCCGACGC GGCCGCGATT
CTCAACATCA CGCAGGATCA CCTCGACTGG CATGGCAGCT TCGACGCGTA TGCGGCGGCG
AAGGGCCGCG TCTTCGGCGC GACGACCACC CGCGTGCTCA ATCGCGACGA TGCGGCCGTG
ATGAAGTTCG CGCCGGCCGC CGGCGCAGCC GATGCGGCGC GCACGGTCAC GTTCGGCCTG
AACGAGCCGG CGCAGCAGGG CGACTACGGC CTGTCGCGCG ACAACGGCAT CGCGTGGCTG
GTCGAGGCGG TCGACCGCGA CGCGCCGGAC GAGACGACGA GCCGCCGGCG CAAGCGCGAC
GGCGTGCATA CGCCCGACAT CGCGCAAAAG CGCCTGATGC CGGCCGACGC GCTGCGCATT
CGCGGGCTGC ACAACGCGGC GAACGCACTG GCCGCGTTCG CGCTCGCGCG TGCGATCGAC
CTGCCGGCCG CGCCGCTGCT GCATGCGCTG CGCGAATACC GCGGCGAAGC GCATCGCGTC
GAGGTGATCG CGACGATCGA CGACGTGGAC TACGTCGACG ACAGCAAGGG AACGAACGTC
GGCGCGACGG TGGCCGCGCT CGACGGACTC GCGCAGAAGA TCGTGCTGAT CGCGGGCGGC
GACGGCAAGG GGCAGGATTT CGCGCCGCTG GTCGCGCCCG TCGCGCGGTG GTGCCGCGCG
GTGATGCTGA TCGGCCGCGA TGCGCCGGCG ATCCGCGACA CGCTCGCCGA GACGGGTGTG
CCGCTTGCCG ACCACGCGAC CCTCGAGGCG GCGGTGCATG CGGCGGCCGA GCTCGCGGAG
CCGGGCGACG CGGTGCTGCT GTCGCCCGCG TGCGCGAGCC TCGACATGTT CAGGAACTAC
GCCCATCGCG CGGATGTGTT CCGCGCGGCC GTGGACGAAA TCGCCATCGA CAAAGGAGCG
ACGACATGA
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| Protein sequence | MFGDRQRPMV LVLGLGESGL AIARWCARHG CRLRIADTRE APPNLAALQA EGIDAEFVGG
PFTPSLLDGG VEIVGLSPGL SPLEPALAAL IAAANERAIA VWGELEFFAQ ALRALGTSGY
QPKVLAITGT NGKTTTTNLT GLLCQRSGKK VAVAGNISPA MLDRLARAID ETALPDVWVL
ELSSFQLETA RTFAPDAAAI LNITQDHLDW HGSFDAYAAA KGRVFGATTT RVLNRDDAAV
MKFAPAAGAA DAARTVTFGL NEPAQQGDYG LSRDNGIAWL VEAVDRDAPD ETTSRRRKRD
GVHTPDIAQK RLMPADALRI RGLHNAANAL AAFALARAID LPAAPLLHAL REYRGEAHRV
EVIATIDDVD YVDDSKGTNV GATVAALDGL AQKIVLIAGG DGKGQDFAPL VAPVARWCRA
VMLIGRDAPA IRDTLAETGV PLADHATLEA AVHAAAELAE PGDAVLLSPA CASLDMFRNY
AHRADVFRAA VDEIAIDKGA TT
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