| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0484 |
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| Symbol | |
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| ID | 6177822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 548935 |
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| End bp | 550341 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641680231 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001807197 |
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| Protein GI | 172059545 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGC TCAGTCTCGG CGAAGCCGCC CGCCTGATTC CCGGCGCCAC CGTCCACGGC
GATCCGGACA CGACGTTCGA GCGCGTGTCG ACGGACAGCC GCACGGTCGG CCCGGGCGAC
CTGTTCGTCG CGCTGAAGGG CGACCGCTTC GACGCGCACG ACTTCCTGGG CGACGTGGCC
GCGCGTGGCG CAGCCGCGGC GCTCGTCGCG CACGTGCCGG CGGGTCTCGC GATGCCGGTC
GTCGAGGGCG GTGAAACGCG TGCCGCGCTC GGCGCGCTCG CGCACGGCTG GCGCAAGCGC
TTCGCGGTGC CGCTCGTCGC GGTGACGGGC AGCAACGGCA AGACGACCGT CAAGGAAATG
ATCGCGTCGA TCTTCGCGGC GGCAGTCGGC GCCGACGCGC GATTGGCGAC GGCCGGCAAC
CTGAACAACG ACATCGGCGT GCCGCTGACG CTGCTGCGCC TGTCCGGCGC GCATCGCGTC
GCGGTGATCG AACTCGGGAT GAACCACCCG GGCGAGACGG AAATCCTCGC GCGCCTCGCG
GCACCGACCG TCGCGCTCGT CAACAATGCG CAGCGCGAGC ACCAGGAATT CATGGCGACG
GTCGAAGCCG TTGCGCTCGA GCACGCGGCC GTGATCCACG CGCTGACACC GGACGGCGTC
GCGGTGTTCC CGGCCGACGA TGCGTACGCG AGCATCTGGC GCGTCGCGGC AACCGGCAAC
CCGATCCTCG ATTTCGCGCT GCACGATGCC GAACGGCAGG TCGAAGCGCA GGTCACGGGC
CGTCTGCACG GCGGCGAGCT TGCGATCGAC ACGCCGGCGG GCGCGATGAC AGTGCGGCTG
CGCGCGCTCG GCGAGCACAA CGCACGCAAC GCATTGGCGG CAGCGGCGGC GGCGCTCGCG
GCCGGCATCG AGCTGGCCGC GATCAAGCAG GGCCTCGAAT CGTTCGAGCC GGTCAAGGGG
CGTCTGCAGG TCCGGCAGGC GGACGTCGGC AGCCTCGCGG GCGCGACGGT CGTCGATGAT
ACCTACAACG CGAACCCCGA CTCGATGCGC GCGGCGATCG ACGTGCTGGC CGCGCAACCG
GCGCCGCGCG TGCTGGTGAT CGGCGACATG GGCGAGGTCG GCGACGAAGG CCCGGCATTC
CACCGCGAGA TCGGCGCGTA TGCGCGCGAG CGCGGCATCG ATGCGCTATT CGCGCTCGGC
GACGCGTCGC GCGATGCGTG CACGGCGTAC GGCGACACGG CCCGCCATTT CGGCGACGTC
GGCGCGCTGG TGACGGCGCT GCTCGCGGCA GGCTACGGCG CGCAGGCCAC GGTGCTCGTG
AAGGGCTCGC GGTACATGAA GATGGAGCGC GTGGTCGACG CGCTGACGAA CCAACCCGCG
GCGGGCACGG TGCCCGCCAC ACACTGA
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| Protein sequence | MTMLSLGEAA RLIPGATVHG DPDTTFERVS TDSRTVGPGD LFVALKGDRF DAHDFLGDVA
ARGAAAALVA HVPAGLAMPV VEGGETRAAL GALAHGWRKR FAVPLVAVTG SNGKTTVKEM
IASIFAAAVG ADARLATAGN LNNDIGVPLT LLRLSGAHRV AVIELGMNHP GETEILARLA
APTVALVNNA QREHQEFMAT VEAVALEHAA VIHALTPDGV AVFPADDAYA SIWRVAATGN
PILDFALHDA ERQVEAQVTG RLHGGELAID TPAGAMTVRL RALGEHNARN ALAAAAAALA
AGIELAAIKQ GLESFEPVKG RLQVRQADVG SLAGATVVDD TYNANPDSMR AAIDVLAAQP
APRVLVIGDM GEVGDEGPAF HREIGAYARE RGIDALFALG DASRDACTAY GDTARHFGDV
GALVTALLAA GYGAQATVLV KGSRYMKMER VVDALTNQPA AGTVPATH
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