| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0477 |
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| Symbol | |
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| ID | 6178799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 541378 |
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| End bp | 542535 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641680224 |
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| Product | porin |
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| Protein accession | YP_001807190 |
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| Protein GI | 172059538 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT CGCTTCTCGC GCTCGTCGCG CTGGGCGCGT TCGCTGGCGC AGCTCATGCG
CAAAGCAGCG TGACGCTTTA CGGCATCATC GATGAAGGCT TCATCTTCAA CAACAATGCG
AAGGGCGGCC ATCTGTACGG TCTGTCGAGC GGCGTGATGC AAGGCAGCCG CTTCGGCCTG
CGCGGCACCG AAGATCTGGG CGGTGGCCTC AAGGCGATCT TCGTGCTCGA GAACGGTTTT
GACGTCAACT CCGGCAGGCT CGGCCAGGGC GGCCTGATGT TTGGTCGCCA AGCTTACGTC
GGCCTGTCGA GCCAGTTCGG TACGGTCACG CTGGGTCGTC AGTACGACTC CGTCGTCGAC
TTCGTCGGCC CGCTCGAGGC AGGCGACCAG TGGGGCGGCT ACATCGCTGC TCACCCGGGC
GACCTCGACA ACTTCAACAA CGCGTACCGT GTGAACAACG CGGTCAAGTA CACGAGCCCG
ACCTACGGCG GCTTCTCGTT CGGCGGCATG TACAGCTTCG GCGGTCAGGC CGGCCAGTTC
TCGCGGAACC AGGTCTGGTC GCTCGGCGCC GGTTACAACA ACGGCCCGCT GGTGTTGGGT
GTCGGCTACT TGAACGCACG CACGCCGGCG AACTTCGGCG GCATGTTCAA CACCGGCGCG
TCGGCTGCCA CGACGGCCGT GTCGTCGCCG GTGTACGGTG CGTACGCGAA CAGCGCGAAC
ACGTACCAGG TCATCGGTGC GGGCGGCGCG TATACGTTCG GCGCGGCGAC GATCGGCGCG
ACGTACTCGA ACACGAAGTT CAAGGGCTTC TCGGTGGGTC CGTTCGTGAA CCAGACCGCG
ACGTTCAACA ACGGCGAAAT CAACTTCAAG TATCAGCTGA CCCCGGCGCT GATCGTCGGC
GCCGCGTACG ACTACACGCA AGGCAGCAAG ATCGACGGCA ACTCGGCAGC CAAGTACCAC
CAGGGCTCGC TGGGCGTCGA CTACTTCCTG TCGAAGCGCA CGGACGTCTA CGTGATCGGC
GTGTACCAGC ATGCATCGGG CAACGCGCTC GACGCAGCAG GCAACGTCGT TCAGGCACAT
GCTTCGATCA ACGGTCTCGA CCCGTCGACG ACCAGCAACC AGGTCGCAGC TCGCGTCGGC
ATCCGTCACA AGTTCTAA
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| Protein sequence | MKKSLLALVA LGAFAGAAHA QSSVTLYGII DEGFIFNNNA KGGHLYGLSS GVMQGSRFGL
RGTEDLGGGL KAIFVLENGF DVNSGRLGQG GLMFGRQAYV GLSSQFGTVT LGRQYDSVVD
FVGPLEAGDQ WGGYIAAHPG DLDNFNNAYR VNNAVKYTSP TYGGFSFGGM YSFGGQAGQF
SRNQVWSLGA GYNNGPLVLG VGYLNARTPA NFGGMFNTGA SAATTAVSSP VYGAYANSAN
TYQVIGAGGA YTFGAATIGA TYSNTKFKGF SVGPFVNQTA TFNNGEINFK YQLTPALIVG
AAYDYTQGSK IDGNSAAKYH QGSLGVDYFL SKRTDVYVIG VYQHASGNAL DAAGNVVQAH
ASINGLDPST TSNQVAARVG IRHKF
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