| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0476 |
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| Symbol | |
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| ID | 6176470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 539367 |
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| End bp | 541040 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641680223 |
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| Product | Long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001807189 |
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| Protein GI | 172059537 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA TTTGGCTGAA ATCGTACCCA CCCGGCGTTC CAGCCGAAAT TGACGCGTCC
CCGTACCCCT CCATTCCGGA CCTCCTCGAC GAAAGCTTCA GGCAGTATCG CGACCGCAAG
GCGTTCGTCT GCATGGGCAA AAGCATCACG TACGGCGAGC TCGATGCGCT GTCGCGGCAG
TTCGGCGCGT GGCTGCAGTC GCGCGGTCTG GCGCGCGGCG CGCGCGTCGC CCTGATGATG
CCGAACGTGC TGCAGTATCC GGTGGCGATC GTCGCGGTGC TGCGCGCGGG CTACACCGTC
GTCAACGTCA ACCCGCTCTA TACGCCGCGC GAGCTCGAAC ATCAGCTGAA GGACAGCGGG
GCGGAGGCGA TCGTCATCCT CGAGAACTTC GCGTCGACGT TGCAGGCCGT CATCGCCAAT
ACCGCGGTCA AGCATGTCGT GGTCGCGTCG ATGGGCGACC TGCTGGGCAT CAAGGGTTGG
CTGGTCAATT ACGTCGTGCG CAGCGTGAAG AAGATGGTGC CGGCTTGGCA GCTTCCGTCG
TTTACGCGCT TCAAGGCCGC GCTGTCGGAA GGCGCGCGCC AGACCTTCAA GCCGCAGAAG
CTCGGCCCCG ACGACGTCGC GTTCCTCCAG TACACGGGCG GCACGACGGG TGTCGCGAAG
GGCGCGACGC TGCTGCACCG GAACATCGTG TCGAACGTGC TGCAGGCCGG CGCTTGGCAC
CATCCCGCGC ACGAGAAGTA CCCCGACGTG AAGCAGTTCG TGACGGTCGT CGCGCTGCCG
CTCTATCACG TGTTTGCGCT GACGGTCTGC GGATTCCTGA CGATGCGCAC GGGCGGCATG
GGGATCCTGA TTCCGAACCC GCGCGACATC GGCGGCATGA TCAAGGAGCT GAAGGGTTAC
CAGATCTCGA CGATCCCGGC CGTCAACACG CTGTACAACG CGCTGCTGAA CCATCCCGAA
TTCAATCAGC TCGACCTGTC GAAGCTCGCG ATCGCCAACG GCGGCGGCAT GGCGATCCAG
GAAAGCGTCG CGAAGCGCTG GTATGAGAAG ACCCATACGG CAATCGTCGA AGGGTATGGC
CTGTCCGAAA CGTCGCCGGT TGCCACCTGC AATCCCGTGA CGGCGACCGA GTACAGCGGG
ACGATCGGCC TGCCGCTGCC GTCGACCGAG GTTGCCATCC GCGACGATGC CGGCGCGGAC
GTCCCGCTCG GCGAGCCGGG CGAGATCTGC ATCCGCGGAC CGCAGGTCAT GGCCGGCTAC
TGGAACCGTC CGGATGAAAC CGCGAAGGTC ATGTTCCCGG ACGGTTTCTT CAAGACCGGC
GACGTGGGCG TGATGGACGC GCGCGGTTAC GTGAAGATCG TCGACCGGAA GAAGGACATG
ATCCTGGTAT CCGGCTTCAA CGTGTATCCG AACGAGGTCG AGGACGTGGT GGCGTCCCAC
CCGGGCGTGT TCGAGGTGGC GGCGGTCGGC GTGCCGGACG AGCACTCGGG CGAAGCCGTG
AAGCTGTTCG TCGTGAAGAA GGATCCGGCG CTGACCGACA AGGACATCCT CGCGTACTGC
AAGGAGCGGC TCACCGGCTA CAAGCGACCG AAACTCGTCG AGTTCCGCAC GGAGCTGCCG
AAGACGAACG TCGGCAAGAT CCTGCGGCGC GAATTGCGCG ACGGACGCGC GTAA
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| Protein sequence | MEKIWLKSYP PGVPAEIDAS PYPSIPDLLD ESFRQYRDRK AFVCMGKSIT YGELDALSRQ
FGAWLQSRGL ARGARVALMM PNVLQYPVAI VAVLRAGYTV VNVNPLYTPR ELEHQLKDSG
AEAIVILENF ASTLQAVIAN TAVKHVVVAS MGDLLGIKGW LVNYVVRSVK KMVPAWQLPS
FTRFKAALSE GARQTFKPQK LGPDDVAFLQ YTGGTTGVAK GATLLHRNIV SNVLQAGAWH
HPAHEKYPDV KQFVTVVALP LYHVFALTVC GFLTMRTGGM GILIPNPRDI GGMIKELKGY
QISTIPAVNT LYNALLNHPE FNQLDLSKLA IANGGGMAIQ ESVAKRWYEK THTAIVEGYG
LSETSPVATC NPVTATEYSG TIGLPLPSTE VAIRDDAGAD VPLGEPGEIC IRGPQVMAGY
WNRPDETAKV MFPDGFFKTG DVGVMDARGY VKIVDRKKDM ILVSGFNVYP NEVEDVVASH
PGVFEVAAVG VPDEHSGEAV KLFVVKKDPA LTDKDILAYC KERLTGYKRP KLVEFRTELP
KTNVGKILRR ELRDGRA
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