Gene BamMC406_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0468 
Symbol 
ID6178279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp523220 
End bp524344 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content71% 
IMG OID641680210 
ProductMltA domain-containing protein 
Protein accessionYP_001807181 
Protein GI172059529 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0646444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTTG GGCCCCGGCT GGCCGGCTGG GTTGCAGCGG CCGCGACGGC CGCACTGCTT 
GCCGCATGCG GCGGCGCGCC GACGCGGACG TCGACGCTCA AGCCGCCGAC CGGCACGGCG
ATCGTGCCGG GGCAGATCGC CGCGAAGCGG CTGACGCCGG TCGCCTGGCA GCAGGTGCCC
GGCTGGCAGG ACGATTCGCT GATCGGCGCG GCGGCCGCGC TGCGGCAGAA CTGCGTGCGG
CTCGCGCGCC AGCCGGCGTG GCAGCGCGCT TGCGCCGCGG CCGATCGCCT CGACGAACTC
GACGTCAGCG GCGCGCGCGC ATTCTTCGAA ACGTATTTCA CGCCGTTTCA GCTGGCGAAC
ACCGACGGCA CGCTCGACGG GCTCGTGACC GGCTATTACG AGCCGCTGCT GCACGGCTCG
CGCGTGCGGC GCGGTCCTTA CCAGTACGCG CTGTACCGCT GGCCGGCAGG CTATCGCGCC
GGTGCCGCGC TGCCCGCTCG CGCGCAGCTC GAACGCGCCG GCATCCTCAA CGGCAACGAA
CTCGTGTGGG TCGACGATCC GATCGAGGCG TTCTTCCTGC AGGTGCAGGG TTCGGGGCGC
GTGCTGCTCG ACGACGGCTC GGTGATGCGG GTCGGTTTCG GCGGGACCAA CAACCAGCCG
TACCGCTCGA TCGGCAAGTG GCTGCTCGAT CGCGGCGAGT TGACGCCGGC ACAGGCGACG
ATGCAGGGCA TCAAGGCGTG GGCGAAGGCG AACCCGACTC GCGTCGACGC GTTGCTCGAC
ACGAATCCGC GCTTCGTGTT CTTCCGTGAC ATGCCGACCA AGGAAGATGC GCCGCACGGC
GGCGCGGACG GCCCGATCGG CGCGCTCGGC GTGCCGCTCA CGCCCGAGCG TTCGATCGCG
GTCGATCCGT CGTCGATCCC GCTCGGCACG CCCGTGTTCC TGCAGACCAC GCGTCCGTTG
ACGAATACGC CGATGAACCG GCTCGTGTTC GCGCAGGATA CGGGCTCGGC GATCCGGGGC
GGCGTGCGGG CCGACTATTT CTGGGGGCTC GGCGACGACG CTGGCGATCA GGCCGGCCGG
ATGAAGCAGA CCGGCCGGAT GTGGCTGCTG TTCCCGAATT CGTGA
 
Protein sequence
MWFGPRLAGW VAAAATAALL AACGGAPTRT STLKPPTGTA IVPGQIAAKR LTPVAWQQVP 
GWQDDSLIGA AAALRQNCVR LARQPAWQRA CAAADRLDEL DVSGARAFFE TYFTPFQLAN
TDGTLDGLVT GYYEPLLHGS RVRRGPYQYA LYRWPAGYRA GAALPARAQL ERAGILNGNE
LVWVDDPIEA FFLQVQGSGR VLLDDGSVMR VGFGGTNNQP YRSIGKWLLD RGELTPAQAT
MQGIKAWAKA NPTRVDALLD TNPRFVFFRD MPTKEDAPHG GADGPIGALG VPLTPERSIA
VDPSSIPLGT PVFLQTTRPL TNTPMNRLVF AQDTGSAIRG GVRADYFWGL GDDAGDQAGR
MKQTGRMWLL FPNS