| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0461 |
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| Symbol | trpD |
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| ID | 6177765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 517529 |
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| End bp | 518560 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680203 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001807174 |
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| Protein GI | 172059522 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.325477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTA CCCCGCAGGA AGCACTGCAG CGCACGATCG AGCACCGCGA AATCTTCCAC
GACGAGATGC TGCACCTGAT GCGGCTCATC ATGCGCGGCG ACATGTCGCC CGTGATGGCG
GCCGCGATCA TCACCGGGCT GCGCGTGAAG AAGGAGACGA TCGGCGAGAT CGCCGCCGCC
GCGACCGTGA TGCGCGAATT CGCGAATCAC GTCGAGGTGC AGGACAACTC GAACTTCGTC
GACATCGTCG GCACGGGCGG CGACGGCTCG CACACGTTCA ACATCTCGAC CGCGTCGATG
TTCATCGCGG CAGCGGCCGG CGCGAAGGTC GCCAAGCACG GCAACCGCGG CGTGTCGAGC
AAGTCCGGCA GCGCCGACGT GCTCGACGCG CTCGGCGTGA ACATCGACCT GCAGCCCGAC
CAGGTTGCCG CGTCGATCGC CGAAACCGGA ATGGGCTTCA TGTTCGCGCC GAACCACCAC
CCGGCGATGA AGAACATCGC GGCCGTGCGC CGCGAGCTGG GCGTGCGGAC GATCTTCAAC
ATTCTCGGCC CGCTGACCAA TCCGGCCGGC GCGCCGAACC AGCTGATGGG CGTGTTCCAC
CCCGACCTCG TCGGCATCCA GGTGCGCGTG ATGCAGCGTC TCGGCGCGCA GCACGTGCTG
GTCGTGTACG GCAAGGACGG GATGGATGAA GTGTCGCTCG GCGCCGCGAC GCTCGTCGGC
GAATTGCGCG ACGGCCAGGT GCACGAATAC GAGATCCATC CGGAGGATTT CGGCCTGCAG
ATGGTGTCGA ACCGCACGCT GAAGGTGGAA AATGCCGAGG AATCGCGCAC GATGCTGCTC
GGCGCGCTGG ACAACCAGCC GGGCGTCGCG CGCGAAATCG TTACACTGAA CGCGGGCACC
GCGCTCTACG CGGCCAATAT CGCCGAATCG ATCGCGGACG GCATCCAGCT CGCCCGCGAA
GCGATCGCGA GCGGCAAGGC GCGCGCGAAG GTCGACGAAC TCGTGCGCTT CACGCAGCAG
TTCAAGCGCT GA
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| Protein sequence | MTITPQEALQ RTIEHREIFH DEMLHLMRLI MRGDMSPVMA AAIITGLRVK KETIGEIAAA
ATVMREFANH VEVQDNSNFV DIVGTGGDGS HTFNISTASM FIAAAAGAKV AKHGNRGVSS
KSGSADVLDA LGVNIDLQPD QVAASIAETG MGFMFAPNHH PAMKNIAAVR RELGVRTIFN
ILGPLTNPAG APNQLMGVFH PDLVGIQVRV MQRLGAQHVL VVYGKDGMDE VSLGAATLVG
ELRDGQVHEY EIHPEDFGLQ MVSNRTLKVE NAEESRTMLL GALDNQPGVA REIVTLNAGT
ALYAANIAES IADGIQLARE AIASGKARAK VDELVRFTQQ FKR
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