| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0456 |
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| Symbol | |
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| ID | 6177766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 512510 |
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| End bp | 514309 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680198 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_001807169 |
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| Protein GI | 172059517 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0474083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC CGATCCGTTA TTCGATTGCC CCGAAAGATC TCGCCGCGCA CCTGTTCGAA
GTGTCGGTGA CAGTCACCGA TCCCGATCCC GAAGGCCAGC GCTTCTCGCT GCCGGTATGG
ATTCCCGGCA GCTACCTCGT GCGCGAGTTC GCGCGCAACA TCGTGACGCT CGCCGCGTTC
AACGACGCGG GCCGCAAGGT GCGGATCGCA AAAACCGACA AGAACACGTG GCAGGCGGCG
CCGGTGAGCG GCACGCTGAC GCTGCGCTAC GACGTGTACG CGTGGGATCT GTCGGTCCGC
TCTGCTTATC TCGACGAATC GGGCGGCTTC TTCAACGCCA CGGCCGTGTT CCTGAGCGTC
GCCGGTCGCG AGAATGCACC GTGCGAAGTC GACATCGCGA AACCGGCGGG CGCGGCGTTC
CGCACATGGC GCGTCGGTAC GTCGCTGCCC GAGGCGCGCG GCACCAGGCG CTACGGGTTC
GGCGCATATC GGGCCTCGAA CTATGACGAG CTCACCGACC ATCCGGTGAC GATCGGCGAA
TTCGCGCTGG CGACGTTCGA CGCGCACGGC GTGCCGCACG ACATCGTGAT CGCCGGTCGC
GTGACGCAGC TCGACATGGA ACGGCTGCGC GCCGACCTGA AGCGCGTGTG CGAAGCGCAG
ATCGCGCTGT TCGAGCCGAA ATCGAGGAAG GCGCCGATGG ACCGCTACGT GTTCATGACG
CTCGCGGTCA GCGACGGCTA CGGCGGCCTC GAGCACCGTG CGTCGACCGC GCTGATCTGC
AACCGTACCG ACCTGCCGGT GAAGGGCCGG TCGGAAACGA CGGAAGGCTA TCGCACGTAT
CTCGGCCTGT GCAGCCACGA GTATTTCCAC ACGTGGAACG TGAAGCGTAT CAAGCCGGCC
GCGTTCGTGC CGTACGACCT CGCGCGGGAG AACTACACGT CGCTGCTGTG GCTGTTCGAG
GGCTTCACGT CGTATTACGA CGACCTGATG CTCGTGCGCA GCGGGCTGAT GTCGCAGGAC
GACTATTTCG CGGCGCTCGG CCGTACCGTC GGCGGCGTGC TGCGCGGCAC GGGGCGCCTG
AAGCAAAGCG TCGCGGACAG CTCGTTCGAC GCGTGGATCA AGTATTACCG CCAGGACGAG
AACGCGACCA ACGCGATCGT CAGCTATTAC ACGAAGGGTT CGCTCGTCGC GCTCGCGTTC
GATCTCGCGA TCCGCGCGCA GACGCGCGAC CGCAAGTCGC TGGACGACGT GATGCGTCTG
CTGTGGCAGC GCTACGGCCG CGAGTTCTAT CGCGGCAAGC AGGCGGGCGT CGAGGAAAAC
GAGGTCGAGG CGCTGATCGA GGAAGCGACG GGTGTGGCCC TTGGCCGACT GTTCGCCGAC
GCCGTGCACG GCACGCGCGA CCTGCCGCTC GCAGATTTGC TCGCGCCGTT CGGCGTGACG
CTCGTGCCCG AGGTCGCGGC TGGCGCGGCC GCGAAACCGA CGATCGGCGC GCGTCTGCGC
GGCGGGGCGG ACTGTACGCT CGCGGCGGTG TACGAGGGCG GCGGCGCGCA TCGCGCGGGG
CTGTCGGCCG GCGACACGCT GATCGCGCTC GACGGGCTGC GCGTCACCGG CACGAATCTC
GACACGCTGC TCGCGCGCTA CCGGCCGGGC GACAAGGTCG AGGTGCACGC ATTCCGCCGC
GACGAGCTGC GGACCGCGAA ACTGAAGCTG GACGGGCCTG AGGTCATGCG CTACCGGCTC
ACGGCGGCCG CGAAACCGGC CGCCGCGCGC AAGTCCCGGG AAATCTGGCT GAAGGGCTGA
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| Protein sequence | MTQPIRYSIA PKDLAAHLFE VSVTVTDPDP EGQRFSLPVW IPGSYLVREF ARNIVTLAAF
NDAGRKVRIA KTDKNTWQAA PVSGTLTLRY DVYAWDLSVR SAYLDESGGF FNATAVFLSV
AGRENAPCEV DIAKPAGAAF RTWRVGTSLP EARGTRRYGF GAYRASNYDE LTDHPVTIGE
FALATFDAHG VPHDIVIAGR VTQLDMERLR ADLKRVCEAQ IALFEPKSRK APMDRYVFMT
LAVSDGYGGL EHRASTALIC NRTDLPVKGR SETTEGYRTY LGLCSHEYFH TWNVKRIKPA
AFVPYDLARE NYTSLLWLFE GFTSYYDDLM LVRSGLMSQD DYFAALGRTV GGVLRGTGRL
KQSVADSSFD AWIKYYRQDE NATNAIVSYY TKGSLVALAF DLAIRAQTRD RKSLDDVMRL
LWQRYGREFY RGKQAGVEEN EVEALIEEAT GVALGRLFAD AVHGTRDLPL ADLLAPFGVT
LVPEVAAGAA AKPTIGARLR GGADCTLAAV YEGGGAHRAG LSAGDTLIAL DGLRVTGTNL
DTLLARYRPG DKVEVHAFRR DELRTAKLKL DGPEVMRYRL TAAAKPAAAR KSREIWLKG
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