Gene BamMC406_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0454 
Symbol 
ID6178392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp510397 
End bp511575 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content71% 
IMG OID641680196 
Productubiquinone biosynthesis hydroxylase family protein 
Protein accessionYP_001807167 
Protein GI172059515 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0640932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA TGACTGCCCA CCACACCTTC GACGTCGCCG TGGTCGGCGG CGGGCTCGTC 
GGCAAGACGG CCGCGCTCGC GCTGACCCAG TCCGGCTACA AGACCGCCTT GCTCGCCCAG
CCGGCGGCGC CGCGCCCCGC CGATCTCGCG TTCGATACGC GCATCTACGC GCTGTCGTCA
AGCTCGCAGG CATTGCTGGA GCGGCTGCGG GTCTGGCAGG CGCTCGACCA TGGCCGGCTC
GCGCCGGTCT ACGACATGCG GGTGTACGGC GACGCGCATG CGGAACTGCA TTTCTCCGCC
TATCAGGCGT CCGTGCCGCA GCTTGCGTGG ATCGCCGAAT CGTCGCTGAT CGAGACGTCG
CTCGACGCCG CGCTGCGGTT CCAGCCGAAC CTCACGTGGT TCGATGCGCG CGCACAAGGC
TTCGACGTGC GCGACGACGC GGCCGTGCTC ACGCTGTCGT CGGGGCAAGT GCTCGAAGCG
GATCTCGTGG TCGGCGCGGA CGGCGCGCAT TCGTGGGTGC GCTCCCAGAT GGGGGCGAGG
ATCGAGCGGC GCGATTACCG GCAGACGGGT GTCGTCGCGA ACTTCAAGGC ATCGCTTCCG
CACCGCGAGA CCGCCAGCCA ATGGTTCCGC GACGGCGAAA TCATCGCGCT GCTGCCGCTG
CCGGACGGTC ACGTGTCGCT CGTGTGGTCC GCGCACACCG CGCACGCGGA CGAACTGCTC
GCGCTCGATC CCGCGCAACT CGCGGCCGAA GTCGAGCGCG TGTCGCACGG GCAGCTCGGC
ACGCTCGAAT GCGTGACGCC GGCCGCCGGT TTCCCGCTCG CGCTGCAGAC CGTCGACAAG
CTGATCGCGC CGCGCGTCGC GCTCGTCGGC GATGCCGCAC ACCTGATCCA TCCGCTCGCG
GGGCAGGGGA TGAATCTCGG CTTGCGCGAC GTCGCGGCGC TCGCCGATGC GATCGCGAAC
AAGGAACCCT TCCGCAACCT CGGCGACACG GTGCTGCTGC GCCGCTACGA GCGTTCGCGC
CGCGAGGACA TCCGCGCGCT GATGGTCGCG ACCGACGGGC TGCAGCGGCT GTTCGCGGTG
CCCGGCTCGT TCGCGAAGGC GGTGCGCAAC GCGGGCATGG CGTTCGTCGG CGCGCAACCG
CTCGTGAAGC GCTGGCTCGT GTCGGCCGCG CTCGGCTGA
 
Protein sequence
MPAMTAHHTF DVAVVGGGLV GKTAALALTQ SGYKTALLAQ PAAPRPADLA FDTRIYALSS 
SSQALLERLR VWQALDHGRL APVYDMRVYG DAHAELHFSA YQASVPQLAW IAESSLIETS
LDAALRFQPN LTWFDARAQG FDVRDDAAVL TLSSGQVLEA DLVVGADGAH SWVRSQMGAR
IERRDYRQTG VVANFKASLP HRETASQWFR DGEIIALLPL PDGHVSLVWS AHTAHADELL
ALDPAQLAAE VERVSHGQLG TLECVTPAAG FPLALQTVDK LIAPRVALVG DAAHLIHPLA
GQGMNLGLRD VAALADAIAN KEPFRNLGDT VLLRRYERSR REDIRALMVA TDGLQRLFAV
PGSFAKAVRN AGMAFVGAQP LVKRWLVSAA LG