Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0427 |
Symbol | |
ID | 6178428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 482519 |
End bp | 483652 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641680169 |
Product | methyltransferase small |
Protein accession | YP_001807140 |
Protein GI | 172059488 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.648824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.521627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGATT TCCCCGTTTT CCACTGGACC GACGCCGACG GCGCCGAACA TGCCGTGCGC TGGCGCTCCG AAGCCGGCGT GCAGCCGCCG AAGCGCGCCG TGCCCGCTGA CGACCGCCTC ACCGCCGATG CCGCGTACCG CCTCGCGTGC GAGGGCACCG CGCTCATCTG GCAGGGCGAC TTCCAGAATG CGCGCCAGCT CGTGCAGGCG ATGGCCCGCC GCGTCGAACG CAAGCCGAAG AAGGCGAAGG CCGCGGCCGG CGCCGACGCA TTCAACCTGC ACCGGCTCGC GCAATCGCAG CGCGCCCGCA CGCTCGGGAT GCTGCTGATC CCGCTCGATG CCGACTACAC GATCCCGCTG CGCCGCGCGC CCGACGTGCG CGCCGCGTGC GAGGAAGCGT ACGGGCCGGG CGGCGCGCCG TCGGTCGTGT CGCTGCGCGA ACTGCTCGGT CTCGTCGGCG CGCACGAATG GCGCAAGAAG GGCGTGCCGA TTCCGGCGCT CGGCGGCGCG CCGATCCATC CGCATTACGG CGTGTTTTCG CCGGTGCGCG GCGAATACGT CGAGCTCGTC GCGCGCGCGC CGCTGCCGGC GACGTCGCTC GCGTTCGACA TCGGCACCGG CACCGGCGTG CTCGCGGCCG TGCTCGCATC GCGCGGCGTC GAGCGTATCG TCGCGACCGA CCAGGATCCG CGCGCGCTCG CGTGTGCACG CGAGAACATC GCGCGGCTCG GCCACGCCGA TCGCGTCGAC GTCGTCGAAG CCGACCTGTT TCCGGCCGGC CGCGCGCCGC TCGTCGTGTG CAACCCGCCG TGGGTGCCGG CCCGCCCGAG CGCGCCGATC GAATACGCGG TCTACGATCC CGACAGCCGC ATGCTGCGCG GTTTCCTCGC CGGGCTCGCC GACCATCTCG AACCGGGCGG CGAAGGCTGG CTGATCCTGT CCGATTTCGC CGAGCATCTC GGCCTGCGGC CGCGCGACAC GCTGTTGCAG TGGATCGATG AAGCCGGTCT CGTCGTGCTC GGCCGCGAAG ACATCCGCCC CGCGCATCCG AAGTCGACCG ACGCGGACGA TCCGCTGCAC GCGGCACGCC GCGCCGAGCT CACGTCGCTC TGGCGGCTCG GCGCGCGGGC CTGA
|
Protein sequence | MTDFPVFHWT DADGAEHAVR WRSEAGVQPP KRAVPADDRL TADAAYRLAC EGTALIWQGD FQNARQLVQA MARRVERKPK KAKAAAGADA FNLHRLAQSQ RARTLGMLLI PLDADYTIPL RRAPDVRAAC EEAYGPGGAP SVVSLRELLG LVGAHEWRKK GVPIPALGGA PIHPHYGVFS PVRGEYVELV ARAPLPATSL AFDIGTGTGV LAAVLASRGV ERIVATDQDP RALACARENI ARLGHADRVD VVEADLFPAG RAPLVVCNPP WVPARPSAPI EYAVYDPDSR MLRGFLAGLA DHLEPGGEGW LILSDFAEHL GLRPRDTLLQ WIDEAGLVVL GREDIRPAHP KSTDADDPLH AARRAELTSL WRLGARA
|
| |