Gene BamMC406_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0427 
Symbol 
ID6178428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp482519 
End bp483652 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content73% 
IMG OID641680169 
Productmethyltransferase small 
Protein accessionYP_001807140 
Protein GI172059488 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.648824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.521627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATT TCCCCGTTTT CCACTGGACC GACGCCGACG GCGCCGAACA TGCCGTGCGC 
TGGCGCTCCG AAGCCGGCGT GCAGCCGCCG AAGCGCGCCG TGCCCGCTGA CGACCGCCTC
ACCGCCGATG CCGCGTACCG CCTCGCGTGC GAGGGCACCG CGCTCATCTG GCAGGGCGAC
TTCCAGAATG CGCGCCAGCT CGTGCAGGCG ATGGCCCGCC GCGTCGAACG CAAGCCGAAG
AAGGCGAAGG CCGCGGCCGG CGCCGACGCA TTCAACCTGC ACCGGCTCGC GCAATCGCAG
CGCGCCCGCA CGCTCGGGAT GCTGCTGATC CCGCTCGATG CCGACTACAC GATCCCGCTG
CGCCGCGCGC CCGACGTGCG CGCCGCGTGC GAGGAAGCGT ACGGGCCGGG CGGCGCGCCG
TCGGTCGTGT CGCTGCGCGA ACTGCTCGGT CTCGTCGGCG CGCACGAATG GCGCAAGAAG
GGCGTGCCGA TTCCGGCGCT CGGCGGCGCG CCGATCCATC CGCATTACGG CGTGTTTTCG
CCGGTGCGCG GCGAATACGT CGAGCTCGTC GCGCGCGCGC CGCTGCCGGC GACGTCGCTC
GCGTTCGACA TCGGCACCGG CACCGGCGTG CTCGCGGCCG TGCTCGCATC GCGCGGCGTC
GAGCGTATCG TCGCGACCGA CCAGGATCCG CGCGCGCTCG CGTGTGCACG CGAGAACATC
GCGCGGCTCG GCCACGCCGA TCGCGTCGAC GTCGTCGAAG CCGACCTGTT TCCGGCCGGC
CGCGCGCCGC TCGTCGTGTG CAACCCGCCG TGGGTGCCGG CCCGCCCGAG CGCGCCGATC
GAATACGCGG TCTACGATCC CGACAGCCGC ATGCTGCGCG GTTTCCTCGC CGGGCTCGCC
GACCATCTCG AACCGGGCGG CGAAGGCTGG CTGATCCTGT CCGATTTCGC CGAGCATCTC
GGCCTGCGGC CGCGCGACAC GCTGTTGCAG TGGATCGATG AAGCCGGTCT CGTCGTGCTC
GGCCGCGAAG ACATCCGCCC CGCGCATCCG AAGTCGACCG ACGCGGACGA TCCGCTGCAC
GCGGCACGCC GCGCCGAGCT CACGTCGCTC TGGCGGCTCG GCGCGCGGGC CTGA
 
Protein sequence
MTDFPVFHWT DADGAEHAVR WRSEAGVQPP KRAVPADDRL TADAAYRLAC EGTALIWQGD 
FQNARQLVQA MARRVERKPK KAKAAAGADA FNLHRLAQSQ RARTLGMLLI PLDADYTIPL
RRAPDVRAAC EEAYGPGGAP SVVSLRELLG LVGAHEWRKK GVPIPALGGA PIHPHYGVFS
PVRGEYVELV ARAPLPATSL AFDIGTGTGV LAAVLASRGV ERIVATDQDP RALACARENI
ARLGHADRVD VVEADLFPAG RAPLVVCNPP WVPARPSAPI EYAVYDPDSR MLRGFLAGLA
DHLEPGGEGW LILSDFAEHL GLRPRDTLLQ WIDEAGLVVL GREDIRPAHP KSTDADDPLH
AARRAELTSL WRLGARA