Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0424 |
Symbol | |
ID | 6177767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 479076 |
End bp | 481244 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680166 |
Product | peptidase M1 membrane alanine aminopeptidase |
Protein accession | YP_001807137 |
Protein GI | 172059485 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.887692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATCA ACATTCACAA GATGCGTTAT CTACCGCTGG TCGCCGCACT CGCACTCGCC GGTTGCGGCG GCGACGACGG CGGCGTGGGC TCGGCTTCCG CGCTCAGCTC CGCCGGCGCG CCGCACTCGG GCTCGGCGCC CGCCGCCAAC ACGCCGCCGA GTGCCTCCAA CGTCGACAAG AGCGTGTCGC CCGTCGAGCT GCCGGACACC GTGGTGCCGG TCAACTACCG GCTGTGGTTC CGCCCCAACG ACGCGCTGGA CGCGTTCGAC GGGCGCGCCG ACGTCGAAAT CAAGGTGCTG AAGCCGGTCA ACAACATCGT GATCGCCGGC CACCGGATCA AGTTTACGAA CGGCCGCATC ACGCTGCAGC CGGGCAACAT CCAGCTGATC GCGACGCCGC AGGACAAGGG CGACTTCTAC CAGCTGCGCC CCGTCGCCGG CACGATCGCG CCGGGCAACT ATTCGCTGCA CATGGAGTGG TCTGGCATCA TCAACTTCAA GTCGTACGAC GATCCGGCCA CGCAGACGGG CGGCAGTTGC GGCGACGATC CGTATCCGGG CTGCTCGGCC GCGGAAGGCG TGTTCCGCGT CGACCTGAAG GGTACCGACG GCAAGACGAG CGGCGCGATC CTCACGCAGG GCGAAACCAA CCTGTCGCGC CAGTGGTTCC CGGGCTGGGA CGAGCCGGCG TTCCGACCGA CCTATGAAGT GACGGCCGAA GTGCCGCAAA GCTGGCGCGT CGTGTCGAAC GCGGCCGAGA AGCCGTCGAC CAACGTCGGC GGCGGCTACA AGCTCGTGCA GTTCGAGAAG ACCCCGCCGA TGCCGTCGTA CCTGCTGTTC TTCGGCGGCG GCATGTTCGA CACCTACGAG GACGATTTCT CGAGCCCGCT GCCGGGCGGC AAGGGCGGCC TGCACCTGCG CGTGTTCACG CCGCCGGGCA TGAGCGACTG GGCGAAGCCC GCGATGGACC GCACCAAGCA GGCGCTCGAC TACTACTACC GCTACACGGG CATCCCGCTG CCGCTGACGA AGTTCGACAC GGTCGCCGCG AACGACGCGT TCAAGGAGCA GAAGGACCTG AACTTCGGCG GGATGGAGAA CTGGGGGTCG ATCCTCGAGT TCGCCGACGA CATCCTGCCG CAGCCGGGCC AGCCGATGTC GCGTTACGGT AACGAGGTGC TCACGCACGA AGTCGCGCAC CAGTGGTTCG GCGACCTCGT CACGACCGAC TGGTGGGACA ACGTCTGGCT CAACGAGTCG TTCGCGACGT TCTTCGAGAC GAAGACGACG ATCCAGTTCT TCCCCGACGA GTTCAGCTGG CTCGACCAGG TGAAGAACAA GTACCGCGTG ATCAATCGCG ACATCGGCCC GAACGCGTTC CCGGTCGCGC CAAACTTCAA CGACTGGGCG TCGAACGACT TCGTGCTGAG CGCGAGCGCG TTCACGTACG ACAAGGGCGG CCACGTGCTG AAGACGCTCG AGAACTATCT CGGCGAGCAG ACGTTGCGCC AGGGCCTGCA GCAGTATCTG GTCGACTACT CGTTCGGCAA CGGCACGCCG AAGCGCCTGT GGGATGCGCT GTCGAAGGCG AGCGGCCAGT CGGTCGGCCC GATCGGCGAC AGCTACGTGC GCCAGACCGG CGTGCCGCTG ATCTCGCTCG ACACGCAGTG CGACATGACG AAGAACCAGA CGATCGTCAC GCTCAAACAG CAGCCGTTCC CGAACAAGAA CGCGTATCCG GGCCTGCAAT GGACGGTGCC GATCACGCTC GCGTACGGCC AGGGTCTCGC GAAACACACG ACGCTCGCGC TGAAGGATAC GCAGGCGCAG ACGCGAATCG ACGGCTGCAC GGGCGTGGTC GCCGATCCGA GCGGTCTCGA CTACTACGTC GTGAACTACA GCGACGCCGC GTGGAGCGGC CTGCTCACGC AGGTCAACGG CTCGACCGAT CCGGTGCTGC TCGCGAACCT GAAGAGCGAG GCCGCGCTGC TCGTCGCGAA CAACCTCGCG CCGGCTTCGC GTTCGACGTC GATCGGCTCG GTCGCTTCGC CGGCCGCGAT GAAGCTGCGC CAGACGCCGA GCTTCGGCGG CATCGCGCCG ACGGCGAAGG AACGTCCGTC GCTGCGCTAT CAGGGCATGT TCAAGCCGCG CAAGACGCTG ATTCAGTAA
|
Protein sequence | MSINIHKMRY LPLVAALALA GCGGDDGGVG SASALSSAGA PHSGSAPAAN TPPSASNVDK SVSPVELPDT VVPVNYRLWF RPNDALDAFD GRADVEIKVL KPVNNIVIAG HRIKFTNGRI TLQPGNIQLI ATPQDKGDFY QLRPVAGTIA PGNYSLHMEW SGIINFKSYD DPATQTGGSC GDDPYPGCSA AEGVFRVDLK GTDGKTSGAI LTQGETNLSR QWFPGWDEPA FRPTYEVTAE VPQSWRVVSN AAEKPSTNVG GGYKLVQFEK TPPMPSYLLF FGGGMFDTYE DDFSSPLPGG KGGLHLRVFT PPGMSDWAKP AMDRTKQALD YYYRYTGIPL PLTKFDTVAA NDAFKEQKDL NFGGMENWGS ILEFADDILP QPGQPMSRYG NEVLTHEVAH QWFGDLVTTD WWDNVWLNES FATFFETKTT IQFFPDEFSW LDQVKNKYRV INRDIGPNAF PVAPNFNDWA SNDFVLSASA FTYDKGGHVL KTLENYLGEQ TLRQGLQQYL VDYSFGNGTP KRLWDALSKA SGQSVGPIGD SYVRQTGVPL ISLDTQCDMT KNQTIVTLKQ QPFPNKNAYP GLQWTVPITL AYGQGLAKHT TLALKDTQAQ TRIDGCTGVV ADPSGLDYYV VNYSDAAWSG LLTQVNGSTD PVLLANLKSE AALLVANNLA PASRSTSIGS VASPAAMKLR QTPSFGGIAP TAKERPSLRY QGMFKPRKTL IQ
|
| |