| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0419 |
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| Symbol | |
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| ID | 6178225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 470543 |
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| End bp | 471532 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680161 |
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| Product | hypothetical protein |
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| Protein accession | YP_001807132 |
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| Protein GI | 172059480 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.659146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA CCGTTCAGGC GCAGATCGCC TACTTCGGCA AGATTCCGTC GCGCGGCGAC
TTCGTGAAGA GCCCGCACAA TCCGCAGTTG CTGCAGACGC TCGATCGCTG GATCGCGCAG
GCGCTCGAAC TGCTCGCGGA AGATCCGCGC TGGAAGATCG TCTACGAGGA TGCGAAGCCG
ATGCATTTCG CGTTCCTCGG CTCGCGCAGC AAGCTCGCGA TCGCAGGCCA CATGGTCGCG
AGCCACGACG TGTCGATGCG CCGCTTCCCG TTCCTCGGCG CGACCGCGCT GGAAGTCGAC
CGGCCGCTCG CGTTCCTCGC GCGCAGCCCG CTCGCGTTCG CGCGGCTGTG GTCGCGCGTC
GCCGCGCAGA TCCCGCCGCT GCTGGCCAAG GAGGAGCCGC CCGGCGCGCT GCAGGCGCTC
GGCGACACGC AGGTGCCGAT CGACGTCGGC GGCCCCGGCA CGTCGCATGA CGGCACCTTC
AACGACTTCA TCGAACACCA GTCGCTGTAC GGCCTGCAGC AGATGCTGCT CGAAAGCGGC
CATCCGGTCC GGCTGCGCGG CGCGATGCTC GCGCTCGGTT CGCTGTTGCG GCCCGTGATG
CAGAGCGGTT CGTCGCACAT CGAACGCGGC CTCACGCTGC CGCTGCCGGT CGATCCGTTC
TATCGCAGCC TCGTCGCCGC GTTCTGGCTC GAACTGATCG CACCGTTCGT CGCGCAGGCC
GACTTCGAGC TCGCCATCTT CATCGGCTCG ATCGCCGAGC GCGAGCGGTT GATCATCGGC
TTCAACGGCG CGTCCTCGAA GACGCTGCTG AGCGTCGTCG ACCCGCAGAC CTACGCCGCC
CACAACATCG ACATCGACGA TCCCGAGTGG ATCGACGCCC ATGCGCAAAA CGATCACCAG
ATCAGCAAGC TCGTCAGCTA TCTCGACCAA CCGCAACTCT CGCTGCGCGT CGCCATCGAC
GCATTCCGCG AAGCGTTCAT CGGAGGCTGA
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| Protein sequence | MTQTVQAQIA YFGKIPSRGD FVKSPHNPQL LQTLDRWIAQ ALELLAEDPR WKIVYEDAKP
MHFAFLGSRS KLAIAGHMVA SHDVSMRRFP FLGATALEVD RPLAFLARSP LAFARLWSRV
AAQIPPLLAK EEPPGALQAL GDTQVPIDVG GPGTSHDGTF NDFIEHQSLY GLQQMLLESG
HPVRLRGAML ALGSLLRPVM QSGSSHIERG LTLPLPVDPF YRSLVAAFWL ELIAPFVAQA
DFELAIFIGS IAERERLIIG FNGASSKTLL SVVDPQTYAA HNIDIDDPEW IDAHAQNDHQ
ISKLVSYLDQ PQLSLRVAID AFREAFIGG
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