| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0414 |
|---|
| Symbol | |
|---|
| ID | 6178357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 464414 |
|---|
| End bp | 465265 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641680156 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001807127 |
|---|
| Protein GI | 172059475 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.747582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAGAC GAACGAAGCT GGCACGTACG ACGGGTCATG TTCTGGCGAC TTGCCTGTTG
TTCGCAGCCG TGACGGCTTG CGGTAAATCT GAGCCGAGCT ACAGCGGAAT TTCCATCATG
GGCCGGAACT ATCTGCCGTA CAACATGAAC GGCTTCACCA TCACTGATGC TTATGGCAAC
AAGGCAAGCG GTGGTGGAGA CGACCCGCCC GGCGCAGGCG GCGGCAGCGT CGCGTGTTGT
TACAAGCTCA AGGGCACGGA ATTTACGGTC AAGTGGAAGT ACTACGATGC AGATCGATGG
ACGATGGACG ACTCGCATGC GCAGCAAGTC GAGACCAAAG TGGTAATGCC ACCGTCAGCC
GTTCCCGAGA AAGTCGGCAG CCGTATTCTT GAGGTTCATT TCTATCCGGA TCGTCACGTC
GAGTTTCAGT TCCCCGGGCA ACTTCTGGAC GAATCGCGAA TTCCAGTCGT GGATGTTTCC
AGGTGGATGG CGACGCATTA TCAGGAGCAA CTAGACAAGA AATTCGACGA TACGGATGGA
CAGTCGCATC GGCGCATTGC GCGGGCCGTA GCGGCCGCGT GGCTGAAATA CCGGTTGACC
GACCGGAATG ACCTCGAGCA GTACGCGTAT TTCAGTTTGC TCGTGAACAG TCGATTCGAC
GCGCATCCGG AGGTGCAGCG GATCCTTCGG GCAGCCGCCG GAAGGCCTGG TGCGTTCGCC
AAGGCGGTGC AAGCGCTGCC GAAGAACGTG TTGTCCGAAC TGGCGAGCGG CAAGTTCAAG
TCGGTGAACG TACCGACGAT TCCCGAGGGC CTGATGCCGC CTCCGCGCGC AGAGGAGAAG
CAGCATGGCT GA
|
|---|
| Protein sequence | MHRRTKLART TGHVLATCLL FAAVTACGKS EPSYSGISIM GRNYLPYNMN GFTITDAYGN
KASGGGDDPP GAGGGSVACC YKLKGTEFTV KWKYYDADRW TMDDSHAQQV ETKVVMPPSA
VPEKVGSRIL EVHFYPDRHV EFQFPGQLLD ESRIPVVDVS RWMATHYQEQ LDKKFDDTDG
QSHRRIARAV AAAWLKYRLT DRNDLEQYAY FSLLVNSRFD AHPEVQRILR AAAGRPGAFA
KAVQALPKNV LSELASGKFK SVNVPTIPEG LMPPPRAEEK QHG
|
|---|
| |