Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0409 |
Symbol | |
ID | 6178484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 459325 |
End bp | 460446 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641680151 |
Product | ImpA family type VI secretion-associated protein |
Protein accession | YP_001807122 |
Protein GI | 172059470 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCA ATCTTCCCGA GCTGCTGACG CCGATCAGCG ATGCGTCGCC CAGCGGCGAC GACCTGCTGT TCTCGAACGA ATTCGACGCG ATCCAGGACG CGCGGCGCTA CGACGATCCG ACGCTCGACC AGGGCGAGTG GGTGACCGAG ATCAAGGAGG CCGACTGGGG CTTCGTCGTC GATCACGCGG GCGAGCTGCT GCGCACGCGC ACCAAGGACC TGCGGCTCGC CGTATGGCTG ACCGAGGCGC TCGCGCTGGA GGACGGCATC ACCGGCCTCA CCGAAGGCTA TGCGCTGCTG GAAGGCCTGT GCCGCGACTA TTGGGACACC GTACATCCGC TGCCGGAAGG CGACGACGTC GAATACCGGC TCGGCAACGT CGCGTGGCTG TCCGGCCGCA CGGCCGAGTT GCTGCGCGGC ATTCCCGTGA CGGAAGGCGC GTCGAACGCG TTCACCACGC TCGACTGGGA AGTCGCGCAG CATGTGGCGC AGGCCGTGAA GCGCGACCCC GAACACGCGG ACGACATCGC GCGCGGCAAA CCGTCGGTCG AGCAGGTCGA TGCGTCGCGG CGCGTGACGC CGATCGCGTT CTACACGACG CTGCTCGCGA ACCTGAAGGC GTTCGAGTTC TCGCTCGATG CGTTCGAGGA GCGGCTCGTC GAACGCGCGG GCGATTCGGC GCCGAGCTTC CGGCAGGCGC GCGACGCGTT CGAAACCGTG TACCGGCTCG CCGAGCGCTT TGCGCGCGAG CAGGGCTATA CGGGTAGCGC GCCGCATGCG CCGTCGGCAC CGCAGGCGCA GCCCGAGCGC CTCGAGCCGA GCTTCGGCGA CGCGTTCCCC ATCCAGGAGA CCCATGTGCA GTCGCAGACC GCTCCGCGTC CGCCGATGAC GCAAATGATC GCCGGCATCC AGAACCGAGC GCAGGCTGTC GACCAGCTAC GCGCCGTCGC GCGTTACTTC CGGCAGACCG AGCCGCACAG CCCGGTCGCG TATCTCGCGG ACAAGGCCGC CGAATGGGCC GACATGCCGC TGCACAAGTG GCTCGAGAGC GTCGTGAAGG ACGACGGGTC GCTGTCGCAT ATCCGCGAGC TGCTGGGTGT GAGGCCCGAC GAGCAGTCGT GA
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Protein sequence | MPINLPELLT PISDASPSGD DLLFSNEFDA IQDARRYDDP TLDQGEWVTE IKEADWGFVV DHAGELLRTR TKDLRLAVWL TEALALEDGI TGLTEGYALL EGLCRDYWDT VHPLPEGDDV EYRLGNVAWL SGRTAELLRG IPVTEGASNA FTTLDWEVAQ HVAQAVKRDP EHADDIARGK PSVEQVDASR RVTPIAFYTT LLANLKAFEF SLDAFEERLV ERAGDSAPSF RQARDAFETV YRLAERFARE QGYTGSAPHA PSAPQAQPER LEPSFGDAFP IQETHVQSQT APRPPMTQMI AGIQNRAQAV DQLRAVARYF RQTEPHSPVA YLADKAAEWA DMPLHKWLES VVKDDGSLSH IRELLGVRPD EQS
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