| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0399 |
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| Symbol | |
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| ID | 6178376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 447333 |
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| End bp | 448679 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680141 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001807112 |
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| Protein GI | 172059460 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.66694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATT CGGCCAAGGT GCTGTGGGGG GAAGGGCTGT TCCTCCGGCC TCAACACTTT
CAGCGGCAGG ACGCCTACCA CGAGGCGCGC CTGTTCGAAT CCATCCAGGC GATCCAGCCG
TACAACTGGG GCGTGCGCTC GGTGCGCATC GATCGCGATG CGCTCGGCAG CAACGTGCTG
CGCGTGGCCG AGCTCGCGCT CGTGTTCCCG GACGGCGCGC TGTATGCCGC GCCGCAGGCC
GACGACCTGC CGCCGCCGAT CGCGCTCGAC ACGCTGCCCG ACGGCATCAA CGAATTCGTG
TTCTACCTCG CGTTGCACCC GCTGCGCGAG AACGGCGCCA ACTACAGCGA CGATCCGGCC
GCCGGCTTCA TGACGCGTTT CGTCAGCGAG CAGACGAGCG TCGCGGACAA CTTCACCGAC
GCCGCCGAAG CCGACATCAC GTTCCTGAAG ACGCAGGTCA AGCTGATCGC GCACAGCGAG
CCGCGCGACC AGCTGCTGTC GGTGCCGCTC GTGCGCGTGC GCCGCACCGC GACGTCCGGC
TTCGAGATCG ACGACAGCTT CGTGCCGCCG TGCCTCGCGA TCGAGGCTTC GCCGATCCTG
CACCAGCGGT TGCGCCAACT GGTCGACGCG CTGCAGGCGA AGGTCAACGC GCTGTACGGT
TTTCACCGCG AGCCGTCGAA GAACATCATC GAGTTCCGCT CGGGCGACAT CGCGTCGTTC
TGGCTGCTGC ACACCGCGAA TGCCGCGTTC GCGACGCTCG CGCACTTGCA CCAGCATGCG
GCGCTGCATC CGGAACGACT GTTCCAGGAA CTGCTGCGCC TCGCGGGGCA ATTGATGACG
TTCTCGAAGG GCTATACGCT CGCCGATCTC CCCGTGTATC GCCACGACGA TCCGGGCCCG
AGCTTCGCGC GTCTCGACCT GATGCTGCGC GAGCTGCTCG ACACAGTGAT CTCGACGCGC
TACTTCGCGA TCACGCTCGA CGAGGTGCGT CCGTCGTTCC ACCTCGGCCG CCTCGATTCC
GGCAAGATCG ACGACAAGAC CGAGTTCTAC CTTGCCGTGT CCGCGGACAT GCCGAACGTC
GAGCTCATCG ATGCCGTGCC GGCCCGCTTC AAGGTCGGTG CGCCCGACGA CGTCGACAAG
CTCGTGCTGT CTGCGATGCC CGGCGTGCGG CTGTCGTACA CGCCGCAGGT GCCGCCCGCG
ATCCCCGTGC GGCCGGGCGC GTGCTATTTC TCGCTCGATT CGCGCGGCGC GCTGTACGAG
CGCATGCTGC AGGCCCAGTC CGCGATGATC TACGCGCCGA CTGGCATCAA TGACCTGAAA
TTCGAACTGA TCGCGGTCAC CTCATGA
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| Protein sequence | MSYSAKVLWG EGLFLRPQHF QRQDAYHEAR LFESIQAIQP YNWGVRSVRI DRDALGSNVL
RVAELALVFP DGALYAAPQA DDLPPPIALD TLPDGINEFV FYLALHPLRE NGANYSDDPA
AGFMTRFVSE QTSVADNFTD AAEADITFLK TQVKLIAHSE PRDQLLSVPL VRVRRTATSG
FEIDDSFVPP CLAIEASPIL HQRLRQLVDA LQAKVNALYG FHREPSKNII EFRSGDIASF
WLLHTANAAF ATLAHLHQHA ALHPERLFQE LLRLAGQLMT FSKGYTLADL PVYRHDDPGP
SFARLDLMLR ELLDTVISTR YFAITLDEVR PSFHLGRLDS GKIDDKTEFY LAVSADMPNV
ELIDAVPARF KVGAPDDVDK LVLSAMPGVR LSYTPQVPPA IPVRPGACYF SLDSRGALYE
RMLQAQSAMI YAPTGINDLK FELIAVTS
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