| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0369 |
|---|
| Symbol | |
|---|
| ID | 6176061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 408075 |
|---|
| End bp | 409457 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641680114 |
|---|
| Product | cytochrome b/b6 domain-containing protein |
|---|
| Protein accession | YP_001807086 |
|---|
| Protein GI | 172059434 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.723254 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCG ACAACAAGGA AGTCTCCACC ACAGGTCTCA CCGGCTGGAT CGACCAGCGC
TTCCCGCTCA CGTCCACCTG GAAGAAGCAC GTTTCCGAGT ACTACGCGCC GAAGAACTTC
AACTTCTGGT ACTTCTTCGG CTCCCTCGCG CTGCTGGTGC TCGTCAACCA GATCGTCACG
GGCATCTTCC TGACGATGAA CTACAAGCCC GACTCGACGC TCGCGTTCGC GTCGGTCGAG
TACATCATGC GCGAGGTGCC GTGGGGCTGG CTGATCCGCT ACATGCACTC GACCGGCGCA
TCGATGTTCT TCGTCGTCGT GTACCTGCAC ATGTTCCGCG GGCTGATGTA CGGGTCGTAT
CGCAAGCCGC GCGAGCTCGT GTGGATCTTC GGCTGCGCGA TCTTCCTGTG CCTGATGGCC
GAAGCGTTCT TCGGCTACCT GCTGCCGTGG GGCCAGATGT CGTTCTGGGG TGCGCAGGTG
ATCGTCAACC TGTTCTCGGC GATCCCGTTC GTCGGGCCGG ACCTGTCGCT GTGGATCCGC
GGCGACTATG TGGTGTCCGA CGTCACGCTG AACCGCTTCT TCGCGTTCCA CGTGATCGCG
ATTCCGCTCG TGCTGGTCGG CCTCGTGATC GCGCACCTCG TCGCGCTGCA CGAAGTGGGT
TCAAATAATC CGGACGGCAT CGAGATCAAG GCGAAGAAGG ACGCGAACGG CATTCCGCTC
GACGGCATCC CGTTCCATCC GTACTACTCG GTGCACGACT TCTTCGGGGT CTGCGTTTTC
CTGATGGTGT TCGCGCTGAT CGTGTTCTTC TCGCCGGAAA TGGGCGGCTA CTTCCTCGAG
TCGAACAACT TCGTGCCGGC GAACCCGCTG CAGACGCCGC CGGAGATCGC GCCGGTCTGG
TACTTCACCG CGTTCTACGC GATGCTGCGC GCGACCACCG ACCCGTTCAA GATCGTGCTG
ATGATCGTGA TCGCGCTGCT CGGCGTGCTC GCGTTGGTCC GCGCGCGCGG CAAGTGGAAG
ATCGGCTTGC CGGTGCTGGC CGCCGCGATC GTCGTGTTCA TGTTCCTGAC GGAGTCGAAG
TTCTGGGGTG TCGTCGTGAT GGGCTCGGCG GTGATCACGC TGTTCTTCCT GCCGTGGCTC
GACCGCAGCC CGGTGAAGTC GATCCGCTAC CGGCCGCTGT TCCACAAGGT GTTCCTCGGG
ATCTTCGTCG TGGCGTTCCT GACCCTCGCG TTCCTCGGCA CACGGCCGCC ATCGCCGGCC
GCGACGCTGA TTGCGCAGGG CTGCGCGCTG ATCTACTTCG CGTTCTTCCT CGGCATGCCC
GTCTGGACGC CGCTTGGCAC GTTCAAGCAG CCGCCGGAGC GGGTGCGCTT CAAGCCCCAT
TAA
|
|---|
| Protein sequence | MAVDNKEVST TGLTGWIDQR FPLTSTWKKH VSEYYAPKNF NFWYFFGSLA LLVLVNQIVT
GIFLTMNYKP DSTLAFASVE YIMREVPWGW LIRYMHSTGA SMFFVVVYLH MFRGLMYGSY
RKPRELVWIF GCAIFLCLMA EAFFGYLLPW GQMSFWGAQV IVNLFSAIPF VGPDLSLWIR
GDYVVSDVTL NRFFAFHVIA IPLVLVGLVI AHLVALHEVG SNNPDGIEIK AKKDANGIPL
DGIPFHPYYS VHDFFGVCVF LMVFALIVFF SPEMGGYFLE SNNFVPANPL QTPPEIAPVW
YFTAFYAMLR ATTDPFKIVL MIVIALLGVL ALVRARGKWK IGLPVLAAAI VVFMFLTESK
FWGVVVMGSA VITLFFLPWL DRSPVKSIRY RPLFHKVFLG IFVVAFLTLA FLGTRPPSPA
ATLIAQGCAL IYFAFFLGMP VWTPLGTFKQ PPERVRFKPH
|
|---|
| |