Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0357 |
Symbol | |
ID | 6178259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 400018 |
End bp | 400773 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641680102 |
Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
Protein accession | YP_001807074 |
Protein GI | 172059422 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.375791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGA TTCCGGCCAT CGATCTCAAA GACGGTCAGT GTGTGCGCCT CAAACAGGGC GATATGGACC AGGCCACGAT TTTCTCCGAG GACCCGGCGG CGATGGCCCG CAAGTGGGTC GATCTCGGCG CCCGGCGGCT GCATCTGGTC GACCTGAACG GCGCATTCGC CGGCAAGCCG AAGAACCTCG ACGCGATCGA AGCGATCCTC GACGAAGTCG GCGACGAAAT CCCCGTACAG CTCGGCGGCG GCATCCGCAG CCTCGAGACG GTCGAGAAGT ATCTCGACGC CGGTTTGTCC TACGTGATCA TCGGCACGGC GGCCGTGAAG GACCCGGGTT TCCTGCGGGA TGCGTGCACC GCGTTCGCGG GCAACATCAT CGTCGGCCTC GATGCGAAGG ACGGCAAGGT CGCGACCGAC GGCTGGAGCA AGCTGACGGG CCACGAAGTG ATCGATCTCG CGCTGAAGTT CGAGGACTAC GGCGTCGAAT CGATCGTCTA CACCGACATC GGCCGCGACG GGATGCTGCA AGGCATCAAT ATCGAGGCGA CCGTGAAGCT CGCTCAGGCG GTCGGCATTC CGGTGATCGC CAGCGGCGGC CTGTCGAACC TCGCGGACAT CGACAGCCTG TGCGAAGTGG AAGAGCACGG CGTCGAAGGC GTGATCTGCG GCCGTGCGAT CTACTCCGGC GATCTCGATT TCGCGGCCGC GCAAAAGCGC GCGGACGAAC TGAACGGCGA ACTCGACAAC GCGTAA
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Protein sequence | MLLIPAIDLK DGQCVRLKQG DMDQATIFSE DPAAMARKWV DLGARRLHLV DLNGAFAGKP KNLDAIEAIL DEVGDEIPVQ LGGGIRSLET VEKYLDAGLS YVIIGTAAVK DPGFLRDACT AFAGNIIVGL DAKDGKVATD GWSKLTGHEV IDLALKFEDY GVESIVYTDI GRDGMLQGIN IEATVKLAQA VGIPVIASGG LSNLADIDSL CEVEEHGVEG VICGRAIYSG DLDFAAAQKR ADELNGELDN A
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