| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0352 |
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| Symbol | hisD |
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| ID | 6177515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 395372 |
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| End bp | 396688 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680097 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_001807069 |
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| Protein GI | 172059417 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.265185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA CCATCCGCAA ACTCGATTCG ACGAGCGACG GCTTCGGCGC CGCGCTGCGC
GCGCTGCTCG CGTTCGAGGC GAGCGAGGAC GAAGCGATCG AGCAATCGGT CGCGAAGATC
CTCGCCGACG TGAAGTCGCG CGGCGACGCC GCGGTGCTCG AGTACACGAA CCGCTTCGAC
CGGCTGGACG CGAGCAGCGT CGCCGCGCTC GAACTGCCGC AGGACGCGCT GCAGACGGCG
CTCGACGGCC TCGCGCCGAA GGCACGCGCG GCGCTGGAAG CGGCCGCCGC ACGCGTGCGT
GCGTACCACG AGAAGCAGAA GATCGAGTGC GGCACGCATA GCTGGCAGTA CACGGAAAGC
GACGGCACGG TGCTCGGCCA GAAGGTCACG CCGCTCGACC GCGTCGGCCT GTACGTGCCG
GGCGGCAAGG CCGCCTATCC GTCGTCGGTG CTGATGAACG CGATTCCCGC GCGGGTCGCG
GGCGTCGGCG AGATCGTGAT GGTCGTGCCG ACCCCGGACG GCGTGAAGAA CGATCTCGTG
CTCGCCGCGG CGCTGCTCGG CGGCGTCGAT CGCGTGTTCA CGATCGGCGG CGCGCAGGCG
GTCGGCGCGC TCGCGTACGG CACGGCCACG GTGCCGGCGG TCGACAAGAT CTGCGGGCCG
GGCAATGCGT ACGTCGCATC GGCGAAGCGC CGCGTGTTCG GTACGGTCGG CATCGACATG
ATCGCCGGCC CTTCGGAAAT CCTCGTGCTG TGCGACGGCA CGACCGATCC GAGCTGGGTC
GCGATGGACC TGTTCTCGCA GGCCGAACAC GACGAGCTCG CGCAGTCGAT CCTGCTGTGC
CCGGACGCCG CGTTCCTCGA GCGCGTCGAG AAGGCGATCG ACGAGCTGCT GCCGACGATG
CCGCGCCGCG AGGTGATCCG TGCGTCGCTC GAAGGCCGCG GCGCGCTGAT CAAGGTGCGC
GACATGGCCG AAGCGTGCCG GATCGCGAAC GACATCGCGC CCGAGCACCT CGAGATTTCC
GCGCTTGAGC CGCAGCAATG GGGCCAGCAG ATCCGCCATG CCGGCGCGAT CTTCCTCGGC
CGCTACACGA GCGAAAGTCT CGGCGACTAC TGCGCGGGCC CGAACCACGT GCTGCCGACG
TCGCGCACCG CGCGCTTCTC GTCGCCGCTC GGCGTGTACG ACTTCATCAA GCGCTCGAGC
CTGATCGAAG TCAGCGCCGA AGGGGCGCAG ACGCTGGGCG AAATCGCATC CGAGCTCGCG
TACGGCGAAG GGCTGCAGGC GCACGCGCGC AGCGCCGAGC TGCGGATGAA GGGGTGA
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| Protein sequence | MAITIRKLDS TSDGFGAALR ALLAFEASED EAIEQSVAKI LADVKSRGDA AVLEYTNRFD
RLDASSVAAL ELPQDALQTA LDGLAPKARA ALEAAAARVR AYHEKQKIEC GTHSWQYTES
DGTVLGQKVT PLDRVGLYVP GGKAAYPSSV LMNAIPARVA GVGEIVMVVP TPDGVKNDLV
LAAALLGGVD RVFTIGGAQA VGALAYGTAT VPAVDKICGP GNAYVASAKR RVFGTVGIDM
IAGPSEILVL CDGTTDPSWV AMDLFSQAEH DELAQSILLC PDAAFLERVE KAIDELLPTM
PRREVIRASL EGRGALIKVR DMAEACRIAN DIAPEHLEIS ALEPQQWGQQ IRHAGAIFLG
RYTSESLGDY CAGPNHVLPT SRTARFSSPL GVYDFIKRSS LIEVSAEGAQ TLGEIASELA
YGEGLQAHAR SAELRMKG
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