| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0345 |
|---|
| Symbol | |
|---|
| ID | 6178167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 390177 |
|---|
| End bp | 390809 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641680090 |
|---|
| Product | toluene tolerance family protein |
|---|
| Protein accession | YP_001807062 |
|---|
| Protein GI | 172059410 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.33164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA AACTGTTCCT GATTCCCGTT TTCGCGGCGC TGTTCTCGTT CGGCAGCGCA
GCTCACGCGC AAGTCGACCA GTCGAACCCG CAGGCGCTGA TCAAGACGGC GACCCAGCAG
GTGCTCGACG AGGTCAAGCA GCAGACGATC AAGCAGGGCG ACACCAACCG CATCATCACG
ATCGTCAACA AGGACATCCT GCCGTACACG GATTTCCGTC GCACCACGCA GCTCGCGATG
GGCCGCAACT GGCGCGCGGC GTCGGCCGAG CAGCAGCAGC AGGTTCAGGA GCAGTTCAAG
CTGCTGCTGA TCCGCACGTA TTCGGGCGCG CTCGCTCAGC TGAAGCCGGA CCAGCAGATC
CAGTACCCGC CGTTCCGCGC CGATCCGGCC GACACCGACG TCGTCGTGAA GACGGTCGCG
CTGAACAACG GCCAGCCGGT CCAGATCGAC TACCGCCTGT ACAAGACGTC CAACGGCTGG
AAGGTGTATG ACCTGAACGT GCTCGGCGCG TGGCTGATCC AGACGTACCA GCAGCAGTTC
AACGAGAAGA TCCAGCAAAG CGGCGTGGAC GGCCTGATCA AGTTCCTGAC GCAGCGCAAC
CAGGAACTTG CCGCGGGCAA GCAAGCTTCG TGA
|
|---|
| Protein sequence | MMKKLFLIPV FAALFSFGSA AHAQVDQSNP QALIKTATQQ VLDEVKQQTI KQGDTNRIIT
IVNKDILPYT DFRRTTQLAM GRNWRAASAE QQQQVQEQFK LLLIRTYSGA LAQLKPDQQI
QYPPFRADPA DTDVVVKTVA LNNGQPVQID YRLYKTSNGW KVYDLNVLGA WLIQTYQQQF
NEKIQQSGVD GLIKFLTQRN QELAAGKQAS
|
|---|
| |