Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0344 |
Symbol | |
ID | 6178149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 389104 |
End bp | 390069 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641680089 |
Product | VacJ family lipoprotein |
Protein accession | YP_001807061 |
Protein GI | 172059409 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.616995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.360268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGA TCCGCATCAG GCACGCCGCG CTCGCAGTGG CGGCAGTCGC CGCGTTGAGC GGTTGCGCGA CCGTACAGAC GCCGACCAAG GGCGATCCGC TCGAAGGCTT CAACCGGTCG ATGTACAAGT TCAACGACAC GGTCGACACG TATGCGCTGA AGCCGGTCGC GAAGGGCTAC CAGTACGTGG TGCCGCAGCC GGTGCGCGAC AGCGTGACGA ACTTCTTCTC GAACATCGGC GACGTCTACA TCGCGGCGAA CAACATCGTG CAGCTGCGGA TCGCGGACGG CGTCGGCGAC ATCATGCGCG TCGTGATCAA CACTGTGTTC GGCGTCGGCG GCCTGTTCGA CGTCGCGACG ATCGCGAAAC TGCCGAAGCA CACGGCCGAC TTCGGGATCA CGATGGGCCG CTACGGCATG CCGTCGGGCC CGTACCTCGT GCTGCCGCTG CTCGGCCCGA GCACGCTGCG CGACACGGCC GGCCTCGGCG TCGACTACGT CGGCAACCCG CTCACCTACG TGAAGCCGGA CGGCCTGAGC TGGGGCCTGT TCGGCGTGAA CCTCGTCAAC ACGCGCGCGA ACCTGCTCGG CGCGGGCGAC GTGCTGGATG CCGCAGCGCT CGACAAGTAT TCGTTCGTAC GCAACGCGTA CCTGCAGCGC CGCCAGATGC TGATCAGCAA CGCGCGGGGC GAGGCCGCGG CGACGTCGAG CAACGACGCG CTGCCGAAGT ACGATCTGCC GGACGACGGC GCGGCACCGG CGGCAGCCGG CGCGGCCGGT ACGGCGGGCG CGGCGGCGGT GGGTGGCGCG ACGGCGCCGG CGGGCGCATC GGGCGCGGCG GTGCCCGCAC CGGCGTCGGG CACGCCCGAA GCGCCGAACC CGGCCAGCGA AACGAACGTG CCGGCGATGC AGGTCGCGCC GCCGTCGCCG GGCGGGTTCC GCTTCCCGAG CATCCGGCTG CACTGA
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Protein sequence | MQTIRIRHAA LAVAAVAALS GCATVQTPTK GDPLEGFNRS MYKFNDTVDT YALKPVAKGY QYVVPQPVRD SVTNFFSNIG DVYIAANNIV QLRIADGVGD IMRVVINTVF GVGGLFDVAT IAKLPKHTAD FGITMGRYGM PSGPYLVLPL LGPSTLRDTA GLGVDYVGNP LTYVKPDGLS WGLFGVNLVN TRANLLGAGD VLDAAALDKY SFVRNAYLQR RQMLISNARG EAAATSSNDA LPKYDLPDDG AAPAAAGAAG TAGAAAVGGA TAPAGASGAA VPAPASGTPE APNPASETNV PAMQVAPPSP GGFRFPSIRL H
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