Gene BamMC406_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0338 
Symbol 
ID6177501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp384636 
End bp384833 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content71% 
IMG OID641680083 
Productsulfur carrier protein ThiS 
Protein accessionYP_001807055 
Protein GI172059403 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.518448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.375148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCC AGATCAACCA ACAGACCCTG ACGCTGCCCG ACGGCGCGAC GGTGGCCGAC 
GCGCTCGTCG CGTTCGGCGC GCGTCCGCCT TACGCAGTCG CGCTGAACGG CAATTTCGTC
GCGCGCACGC AGCATGCGGC GCGCGCGCTC GCGACGGGCG ACAAGCTCGA CGTGGTGCAC
CCCGTCGCGG GCGGCTGA
 
Protein sequence
MDIQINQQTL TLPDGATVAD ALVAFGARPP YAVALNGNFV ARTQHAARAL ATGDKLDVVH 
PVAGG