| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0336 |
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| Symbol | |
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| ID | 6177557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 381074 |
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| End bp | 382843 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680081 |
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| Product | ABC transporter |
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| Protein accession | YP_001807053 |
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| Protein GI | 172059401 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.294433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.265185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAT CGATCGATCC CGTCCGCTCC GCCTCAGACG CGCCGCAGGA CGAGCGCCCG
GTATCCGCAT GGAGCCTCAT CAAGCCCTAC TGGGTGTCGT CCGAATGGAA AACCGCGTGG
GGACTGCTCG TCACGATCAT CGTGATCAAT CTCTGCGTCG TCTGGATCAA CGTCAAGCTG
AACAAGTGGA ACGCGCAGTT CTACAACGCG CTGCAGTCGA AGGACGTCCA CGACTTCCCG
AACCTGCTGA TGCAGTTCTC GGCACTCGCG TTCGGCTTCA TCATCCTCGC GGTGTACGGC
CGCTACCTGC GACAGATGCT CGGGTTCCGC TGGCGCCAGT GGCTCACCGA CCGCTTTCTC
GGCCAGTGGC TCGGCGATCG CGCGTTCTAC CGGATCGAGC GCGACCGCCT CGCCGACAAC
CCCGACCAGC GGATCACCGA CGACCTCCAG TCGTTCGCGA CGACGACGCT CGCGCTGTCG
CTCGACCTGC TGTCGACGGT CGTCACGCTC GTGTCGTTCA TCACGATCCT GTGGTCGCTC
GCCGGCGCGC TGACGCTCTC GCTCGGCGCG ACGCCGATCA CGATCCCCGG CTACATGGTG
TGGGCGGCCG CGCTGTACGC GGTGGTCGGC TCGCTGATCA TCCAGAAGGT CGGCCACCCG
CTCGTGTCGA TCAACTACCA GCAGCAGCGC GTCGAGGCCG ATTTCCGCTT CGGGCTGATC
CGCGTGCGCG AGAACGCCGA GCAGATCGCG TTCTACGACG GCGAGAAAAC CGAGACCCGC
AACGCGCAGA GCCTGTTCAT GCGCATTCGC GACAACTGGT GGCGCGTGAT GAAGTACACG
AAGCGCCTCA CGTTCGTGCT GAGCTTCTAC GGGCAGATCG CGATCATCTT CCCGCTCGTC
GTCGCCGCGC CGCGCTATTT CGCGGGCGCG TTCTCGTTCG GCGTGCTGAT GCAGATCTCG
TCCGCGTTCG GCACCGTCAG CGATTCGTTC TCGTGGTTCA TCAACAGTTA CTCGACCCTC
GTCGAATGGC GCGCGACCGT CAACCGTCTG CGTGAATTCA AGCGCGTGAT GGGCACGTCG
CACCTGAAGG AAAGCCTGTC GCCGGCAACC GAGCACGGCG GCATCAACCT GCACTACGTC
GATGCCGCGA AGCTGTCCAC ATCGTCGCTG AAGCTCGCGC TGCCGAACGG CACCGCGCTC
GCGAACATCG GCAACCTGAC GATCGAACCC GGCTCGCGCT GGCTCGTGAT CGGCAAGTCG
GGTTCCGGCA AGAGCACGTT CATGCGTGCG CTCGCGGGCC TGTGGCCGTT CGGCGACGGC
GCGATCGACG CGCCGGTCGG CGCGCGAATG ATGTTCGTGC CACAGACGAG CTACTTGCCG
ATCGGCACGC TGAAGGCCGC GCTCACCTAT CCGGCGCCGC CCGACGCGTT CACCGACGAT
GCATGCCGCG ACGCGCTGCG CGCGTGCCAC CTCGAAGACT ACGTCGGGCG CCTCGACGAG
ACCGGCCACT GGACGCGCGT GCTGTCGCCC GGCGAACAGC AGCGTCTCGC CGGCGCGCGC
GTGCTGCTGC ACAAGCCGGA CTTCCTGTTC CTCGACGAAG CGACGAGCGC GCTCGACGCG
GACAACGAAG CACGGCTGTA TCACCTGTTC GCCGAACGGC TGCCGAAGGC CGCGATCGTC
AGCATCGCCC ACCGCGAATC GCTGGCCGCG TTCCACGTCG GCATGATCAA CGTCGAGCGC
GTGACCGACA CCGACAAGGT CGCCGCTTAA
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| Protein sequence | MTQSIDPVRS ASDAPQDERP VSAWSLIKPY WVSSEWKTAW GLLVTIIVIN LCVVWINVKL
NKWNAQFYNA LQSKDVHDFP NLLMQFSALA FGFIILAVYG RYLRQMLGFR WRQWLTDRFL
GQWLGDRAFY RIERDRLADN PDQRITDDLQ SFATTTLALS LDLLSTVVTL VSFITILWSL
AGALTLSLGA TPITIPGYMV WAAALYAVVG SLIIQKVGHP LVSINYQQQR VEADFRFGLI
RVRENAEQIA FYDGEKTETR NAQSLFMRIR DNWWRVMKYT KRLTFVLSFY GQIAIIFPLV
VAAPRYFAGA FSFGVLMQIS SAFGTVSDSF SWFINSYSTL VEWRATVNRL REFKRVMGTS
HLKESLSPAT EHGGINLHYV DAAKLSTSSL KLALPNGTAL ANIGNLTIEP GSRWLVIGKS
GSGKSTFMRA LAGLWPFGDG AIDAPVGARM MFVPQTSYLP IGTLKAALTY PAPPDAFTDD
ACRDALRACH LEDYVGRLDE TGHWTRVLSP GEQQRLAGAR VLLHKPDFLF LDEATSALDA
DNEARLYHLF AERLPKAAIV SIAHRESLAA FHVGMINVER VTDTDKVAA
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