Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0334 |
Symbol | |
ID | 6178161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 378949 |
End bp | 380463 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641680079 |
Product | amino acid carrier protein |
Protein accession | YP_001807051 |
Protein GI | 172059399 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.33164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGCAT TCGTGCAAGG GCTGATCGAT GCGGTCAACG GCGTGCTGTG GAACTACGTG CTGATCGCGC TGCTGCTCGG CGTGGGCGCG TGGTTCACGC TGCGGTTCCG GATGATCCAG TTGAAGGCGC TGTTCCTCAG CATGAAGCTG GTCGGCAGCA AGGGCGAGCC GGGCAGCATC TCGTCGTTCC AGGCATTCGC GACCGGCCTC GCGAGCCGCG TGGGCACCGG CAACATCGCG GGTGTCGCGG TCGCGCTGAC GGTCGGCGGG CCGGGCGCGA TCTTCTGGAT GTGGATGACG GCGCTCGTCG GCATGTCGTC CGCGTTCGTC GAGGCGACGC TCGCGCAGAT CTTCAAGGTG TCGCACCCGG ACGGCAGTTA TCGCGGCGGC CCCGCGTACT ACATCCAGAC AGGCCTGCGC TCGCGCGGCT TCGGCGTGCT GTTCTCGCTG TCGCTGATCC TCGCGTTCGG CTTCGTGTTC AACGCGGTGC AGGCCAATGC GATCGCCGAT GCATTTCACA CGTCGTTCGG CTGGAGCCGC GAGACGGTCG GCCTCGGCCT CGTGCTGCTC ACCGCGCCGC TCATCTTCGG CGGCGTTCGT CGCATCGCGT CGGTCGCGCA GGTGATCGTG CCGGTGATGG CGATCGGCTA CCTCGCGCTG GCCGTCTACG CGGTCGCGAC GCACGCGGCG CTGGTGCCGG GCGTGCTCGC GCTGATCGTG AAGAGCGCGT TCGGGCTCGA GCAGGCGGCG GGCGGCCTGA CCGGCTATGC GGTCAGCCAG GCAGTCGGGA TGGGCGTGAA ACGCGGGCTG TTCTCGAACG AAGCCGGCAT GGGTAGCGCG CCGAACGCGG CCGCGACCGC GAGCGTGCGG CATCCGGTCG TGCAGGGGCT GATCCAGATG CTCGGCGTGT TCGTCGACAC GATCGTGATC TGCAGCGCGA CCGCGTTCGT GATCCTGCTG TCGGGCCAGT ACGAACTCGG CACCGGCATG GAAGGCGCGG CGCTCACGCA GCGCGCGATC GCGAGTCACG TCGGCGGTTG GGGCGGCATC TACATGGCCG TCGCGATCTT CTTTTTCGCG TACTCGTCGG TGATCGGCAA CTACGCGTAT GCGGAAGGCA ACGTCGAGTT CATCACGAAG CGGCGCGGCG TGCTGCCGCT GTTCCGCATC GCGGTGCTGG GGATGGTGAT GTTCGGCAGC GTCGGGCAAC TGCCGCTGGT GTGGGCGATG GCCGATACGA GCATGGGGCT GATGGCGATC ATCAACCTGG TCGCGATTCT CGCGCTCGGC AAGTATGCGC ATGCCGCGTG GCGCGACTAT CGCCACCAGC GCGCGCAGGG CATTGCCGAA CCGGTGTTCA CGCGCAACAC GATTCCCGAG CTCGCACGCG TGCTGCCGGC CGACGTGTGG GGCGAGCACG GCCCGTTGCC GCTGCGTCCG GCTTCGTCCG ATGCGGTGGA CGAAGCAATG AACGACGCGG TGGCCGAAGC CCGCGTCGCG GTGCGCGAGT CATGA
|
Protein sequence | MEAFVQGLID AVNGVLWNYV LIALLLGVGA WFTLRFRMIQ LKALFLSMKL VGSKGEPGSI SSFQAFATGL ASRVGTGNIA GVAVALTVGG PGAIFWMWMT ALVGMSSAFV EATLAQIFKV SHPDGSYRGG PAYYIQTGLR SRGFGVLFSL SLILAFGFVF NAVQANAIAD AFHTSFGWSR ETVGLGLVLL TAPLIFGGVR RIASVAQVIV PVMAIGYLAL AVYAVATHAA LVPGVLALIV KSAFGLEQAA GGLTGYAVSQ AVGMGVKRGL FSNEAGMGSA PNAAATASVR HPVVQGLIQM LGVFVDTIVI CSATAFVILL SGQYELGTGM EGAALTQRAI ASHVGGWGGI YMAVAIFFFA YSSVIGNYAY AEGNVEFITK RRGVLPLFRI AVLGMVMFGS VGQLPLVWAM ADTSMGLMAI INLVAILALG KYAHAAWRDY RHQRAQGIAE PVFTRNTIPE LARVLPADVW GEHGPLPLRP ASSDAVDEAM NDAVAEARVA VRES
|
| |