Gene BamMC406_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0334 
Symbol 
ID6178161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp378949 
End bp380463 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content68% 
IMG OID641680079 
Productamino acid carrier protein 
Protein accessionYP_001807051 
Protein GI172059399 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.33164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAT TCGTGCAAGG GCTGATCGAT GCGGTCAACG GCGTGCTGTG GAACTACGTG 
CTGATCGCGC TGCTGCTCGG CGTGGGCGCG TGGTTCACGC TGCGGTTCCG GATGATCCAG
TTGAAGGCGC TGTTCCTCAG CATGAAGCTG GTCGGCAGCA AGGGCGAGCC GGGCAGCATC
TCGTCGTTCC AGGCATTCGC GACCGGCCTC GCGAGCCGCG TGGGCACCGG CAACATCGCG
GGTGTCGCGG TCGCGCTGAC GGTCGGCGGG CCGGGCGCGA TCTTCTGGAT GTGGATGACG
GCGCTCGTCG GCATGTCGTC CGCGTTCGTC GAGGCGACGC TCGCGCAGAT CTTCAAGGTG
TCGCACCCGG ACGGCAGTTA TCGCGGCGGC CCCGCGTACT ACATCCAGAC AGGCCTGCGC
TCGCGCGGCT TCGGCGTGCT GTTCTCGCTG TCGCTGATCC TCGCGTTCGG CTTCGTGTTC
AACGCGGTGC AGGCCAATGC GATCGCCGAT GCATTTCACA CGTCGTTCGG CTGGAGCCGC
GAGACGGTCG GCCTCGGCCT CGTGCTGCTC ACCGCGCCGC TCATCTTCGG CGGCGTTCGT
CGCATCGCGT CGGTCGCGCA GGTGATCGTG CCGGTGATGG CGATCGGCTA CCTCGCGCTG
GCCGTCTACG CGGTCGCGAC GCACGCGGCG CTGGTGCCGG GCGTGCTCGC GCTGATCGTG
AAGAGCGCGT TCGGGCTCGA GCAGGCGGCG GGCGGCCTGA CCGGCTATGC GGTCAGCCAG
GCAGTCGGGA TGGGCGTGAA ACGCGGGCTG TTCTCGAACG AAGCCGGCAT GGGTAGCGCG
CCGAACGCGG CCGCGACCGC GAGCGTGCGG CATCCGGTCG TGCAGGGGCT GATCCAGATG
CTCGGCGTGT TCGTCGACAC GATCGTGATC TGCAGCGCGA CCGCGTTCGT GATCCTGCTG
TCGGGCCAGT ACGAACTCGG CACCGGCATG GAAGGCGCGG CGCTCACGCA GCGCGCGATC
GCGAGTCACG TCGGCGGTTG GGGCGGCATC TACATGGCCG TCGCGATCTT CTTTTTCGCG
TACTCGTCGG TGATCGGCAA CTACGCGTAT GCGGAAGGCA ACGTCGAGTT CATCACGAAG
CGGCGCGGCG TGCTGCCGCT GTTCCGCATC GCGGTGCTGG GGATGGTGAT GTTCGGCAGC
GTCGGGCAAC TGCCGCTGGT GTGGGCGATG GCCGATACGA GCATGGGGCT GATGGCGATC
ATCAACCTGG TCGCGATTCT CGCGCTCGGC AAGTATGCGC ATGCCGCGTG GCGCGACTAT
CGCCACCAGC GCGCGCAGGG CATTGCCGAA CCGGTGTTCA CGCGCAACAC GATTCCCGAG
CTCGCACGCG TGCTGCCGGC CGACGTGTGG GGCGAGCACG GCCCGTTGCC GCTGCGTCCG
GCTTCGTCCG ATGCGGTGGA CGAAGCAATG AACGACGCGG TGGCCGAAGC CCGCGTCGCG
GTGCGCGAGT CATGA
 
Protein sequence
MEAFVQGLID AVNGVLWNYV LIALLLGVGA WFTLRFRMIQ LKALFLSMKL VGSKGEPGSI 
SSFQAFATGL ASRVGTGNIA GVAVALTVGG PGAIFWMWMT ALVGMSSAFV EATLAQIFKV
SHPDGSYRGG PAYYIQTGLR SRGFGVLFSL SLILAFGFVF NAVQANAIAD AFHTSFGWSR
ETVGLGLVLL TAPLIFGGVR RIASVAQVIV PVMAIGYLAL AVYAVATHAA LVPGVLALIV
KSAFGLEQAA GGLTGYAVSQ AVGMGVKRGL FSNEAGMGSA PNAAATASVR HPVVQGLIQM
LGVFVDTIVI CSATAFVILL SGQYELGTGM EGAALTQRAI ASHVGGWGGI YMAVAIFFFA
YSSVIGNYAY AEGNVEFITK RRGVLPLFRI AVLGMVMFGS VGQLPLVWAM ADTSMGLMAI
INLVAILALG KYAHAAWRDY RHQRAQGIAE PVFTRNTIPE LARVLPADVW GEHGPLPLRP
ASSDAVDEAM NDAVAEARVA VRES