| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0331 |
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| Symbol | gltD |
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| ID | 6177950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 375308 |
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| End bp | 376774 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680076 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001807048 |
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| Protein GI | 172059396 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.718365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.62843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGG CAACCGGTTT TCTGGAGTTC GAACGCCGCC ACGAGGCGTA CGAAGCACCG
CTCACGCGCG TGAAGCATTA CAAGGAATTC GTCGCGGCGC TGACCGACGC GGACGCGAAG
GTCCAGGGCG CGCGCTGCAT GGATTGCGGC ATCCCGTTCT GCAACAACGG CTGCCCGGTC
AACAACATCA TCCCGGACTT CAACGATCTC GTTTACCGCC AGGACTGGCA GCAGGCGATC
GAAGTCCTGC ATTCGACCAA CAACTTCCCC GAGTTCACGG GCCGCATCTG CCCGGCGCCG
TGCGAGGCGG CGTGCACGCT CGGGATCAAC GACGATCCGG TCGGCATCAA GTCGATCGAG
CACGCGATCA TCGACAAGGC CTGGGCGGAA GGCTGGGTGA AGCCGCTGCC GCCCGAGCAC
AAGACCGGCA AGACGGTCGC GGTCGTCGGT TCGGGCCCCG CGGGCCTCGC CGTCGCACAG
CAGCTCGCGC GTGCGGGCCA CGACGTGACG GTGTTCGAGA AGAACGATCG CATCGGCGGC
CTGCTGCGTT ACGGGATCCC CGACTTCAAG CTCGAGAAGT GGCTGATCGA TCGCCGCATG
CGCCAGATGG AAGCGGAAGG CGTGACGTTC CGCACCAGCG TGTTCATCGG CAAGGATCCG
CTGCCCGAGT CGATCGGCAG CCTCGCGAAG GAAACCATTT CGCCGGAGCA GCTGAAGGAA
GAATTCGACG CGGTCGTGAT CGCGGGCGGT TCGGAAACGC CGCGCGACCT GCCGGTGCCG
GGCCGCGAGC TCGCCGGCGT CCATTTCGCG ATGGACTTCT TGCCGCAGCA GAACCGCGTG
AACGCGGGCG ACAAGCTCGT CGACCAGCTG CTCGCGAAGG GCAAGCACGT GATCGTGATC
GGCGGCGGCG ATACGGGTTC GGACTGCGTC GGCACGTCGA ACCGTCACGG CGCGAAGCAG
GTCACGCAGT TCGAGCTGCT GCCGCAGCCG CCGGAAGAGG AAAACAAGCC GCTCGTGTGG
CCGTACTGGC CGATCAAGCT GCGCACGTCG TCGTCGCACG AAGAAGGCTG CGAGCGTGAC
TGGGCGGTCG CGACGAAGCG TCTCGAAGGC AAGAACGGCA AGGTCGAGAA GCTGATCGCG
GTGCGCGTCG AGTGGAAGGA CGGCAAGATG CAGGAAGTGC CGGGCTCCGA ATTCGAGATG
AAGGCCGACC TGGTGCTGCT CGCGATGGGC TTCACGCAGC CGGCAGCCAC CGTGCTCGAG
GCGTTCGGCG TCGCGAAGGA TGCGCGCGGC AACGCGCGTG CGGCAACCGA AGGCGATCGC
TCGTACTACA CGTCGGTCGA CAAGGTGTTC GCGGCCGGCG ACATGCGTCG CGGCCAGTCG
CTCGTCGTGT GGGCGATCCG CGAAGGCCGC CAGTGCGCGC GCTCGGTCGA CGCGTATCTG
ATGGGGCATT CGAACCTGCC GCGATAA
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| Protein sequence | MGKATGFLEF ERRHEAYEAP LTRVKHYKEF VAALTDADAK VQGARCMDCG IPFCNNGCPV
NNIIPDFNDL VYRQDWQQAI EVLHSTNNFP EFTGRICPAP CEAACTLGIN DDPVGIKSIE
HAIIDKAWAE GWVKPLPPEH KTGKTVAVVG SGPAGLAVAQ QLARAGHDVT VFEKNDRIGG
LLRYGIPDFK LEKWLIDRRM RQMEAEGVTF RTSVFIGKDP LPESIGSLAK ETISPEQLKE
EFDAVVIAGG SETPRDLPVP GRELAGVHFA MDFLPQQNRV NAGDKLVDQL LAKGKHVIVI
GGGDTGSDCV GTSNRHGAKQ VTQFELLPQP PEEENKPLVW PYWPIKLRTS SSHEEGCERD
WAVATKRLEG KNGKVEKLIA VRVEWKDGKM QEVPGSEFEM KADLVLLAMG FTQPAATVLE
AFGVAKDARG NARAATEGDR SYYTSVDKVF AAGDMRRGQS LVVWAIREGR QCARSVDAYL
MGHSNLPR
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