Gene BamMC406_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0329 
Symbol 
ID6178001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp369515 
End bp370228 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID641680074 
Producthypothetical protein 
Protein accessionYP_001807046 
Protein GI172059394 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.760659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGT TAGCACGACT CTACGTTCCC GACCAGCCGC AGCACGTGAT ACTGCGCGGC 
CTGGATCAGC AACCCGCGTT CGTCGACGAC CAGGACTACG AACTCTTCAT CGATTGCCTG
AAGGCCGCGG CACGCGATCA CCATCTTTCG GTGCATGCCT ATGTGCTGCT CCCGCGTCAG
GTGCAGCTCC TCGTGACGCC GAGCGACGAG GCGAGCCTGC CGAAGGCGAT GCAGGCGGTC
GGCCGCCGCT ACGTCGCGCA TTTCAACCGG CGCTATTCAC GTCGCGGCAC CCTGTGGGAA
GGCCGCTATC GGGCGACCGT GATCGAAGGC GAGCGCTATT TCCTGCTCGC GAGCCGCGTG
GTCGAGATGA GCCCTGTGCG CGCGCAGCTG GTCGCGACGC CCGACGCCTA TCGCTGGTCG
AGCTACCGGC ACCACGTCGG GCTCACCGTC GACAGCCTGA TCACCGACCA TCCGCTCTAC
TGGGCGCTCG GCAACACGCC GTTCGACCGG CAGCGCGCGT ACAAGGAGCT GTGCGAACAG
CCGCTCGACG AGCGGCAGGC CGATCAGCTC CAGCAAGCGA CGCTGAAGGG CTGGGTGCTC
GGCGGCGAGA ATTACCGCGA GTGGGCGGCC CGCACCGCGA ATCGTCGCGT GTCGCCGCTG
CCGCGCGGAC GCCCCAGAAA GGTGCGTGAA AACACGCCGC CCATCCAGCA ATAG
 
Protein sequence
MARLARLYVP DQPQHVILRG LDQQPAFVDD QDYELFIDCL KAAARDHHLS VHAYVLLPRQ 
VQLLVTPSDE ASLPKAMQAV GRRYVAHFNR RYSRRGTLWE GRYRATVIEG ERYFLLASRV
VEMSPVRAQL VATPDAYRWS SYRHHVGLTV DSLITDHPLY WALGNTPFDR QRAYKELCEQ
PLDERQADQL QQATLKGWVL GGENYREWAA RTANRRVSPL PRGRPRKVRE NTPPIQQ