Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0316 |
Symbol | |
ID | 6177594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 356268 |
End bp | 357191 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641680061 |
Product | hypothetical protein |
Protein accession | YP_001807033 |
Protein GI | 172059381 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.624704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAC GATGGGCGGC GCGGTTCGCG CCGGGCAGGC ACCGTTCGAC GGGCATCGAC GTCGGGGCGG ACGAGGTGAG GGTAGCCGTG CTGAGCCGGC GCGGCCGGGG CGCGGATGTG CGGGTCGAAG GGCTCGAGCG GGAGTCGGTA GGACTCGCGG ACGGTCCGGA GGACGCGCGC TGGGCCGCGG TCGCGCGGGC GTTGGCGGCC GCCGTGTCGC GGCTGTCGGC GGCAGGCGTG CGTTGCGACG CGCATGGCGT GATGGCACTG CGCGACGACG AGATGCGCAC GGCAACGCTC GACCTGGCCG GGCGCGAGGA CGTCGCCCAC GCCGCCCGGC AGGCGGCCGA GCGCATCTCG GGGCTGGCGC CGGACAGTTT CGCGTTCGAC TGGCGGCAGG AGGACGGCGC GCATTCGGGC GAGATCGCGG TCGCCGTGGC GCCGCAGGCA TTGCTCGAGC GGCGGATCGA CGTGGCCGCG CAGGCCGGCA TCGACCTGAC GGCCGTCGAC GGCGAGTCGG CCGCCGCGCT GCGCGCATTG CGCCATGCCG CGCAGTTCGA GCTCGATGCG CAAGTCCCGT ACGCCGCATT CTGGTTCAGC GACACGGGCG TACGCGGCTG GCGGGTCGAC GGCCACGTTG CCGCGCCTAT GCTCGCGGTA TCCGGCGACG TGCAGGCGGC GCTCCCCGAT GCATTGCGCC AGTGCGTATT CGAGCCGGTG CGCTGCGTGC TCGTGGCCGG CGACGCGCGC TGCATTGCCC GCTGCGGTAC GTCGGTCGCC GACATCGGAG ATGCACTCGG CGTGGCGGCG GTGCCGTTCG ACTGCACGGG ATGGAACGGG CTGCCGGGCG AGCCCGGCGG TGTGCCGGAC GCTCCGGCAT TTGCTCTCGC GGTCGGGCTG GCGCTGCGCG GGGTATGGGA ATGA
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Protein sequence | MTARWAARFA PGRHRSTGID VGADEVRVAV LSRRGRGADV RVEGLERESV GLADGPEDAR WAAVARALAA AVSRLSAAGV RCDAHGVMAL RDDEMRTATL DLAGREDVAH AARQAAERIS GLAPDSFAFD WRQEDGAHSG EIAVAVAPQA LLERRIDVAA QAGIDLTAVD GESAAALRAL RHAAQFELDA QVPYAAFWFS DTGVRGWRVD GHVAAPMLAV SGDVQAALPD ALRQCVFEPV RCVLVAGDAR CIARCGTSVA DIGDALGVAA VPFDCTGWNG LPGEPGGVPD APAFALAVGL ALRGVWE
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