| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0315 |
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| Symbol | |
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| ID | 6178094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 353654 |
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| End bp | 356041 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680060 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001807032 |
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| Protein GI | 172059380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.640379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCA CGTCTCCTAC GTCCCCGCCT CCCGCGCCCG AGCCGAAGAA ACGGCCCTGG
TGGCAGAAAG CCCTGATCGG CGTCGCCGCG ATGTGCGTGG CCCTCGTCGT GGCCGGCGGC
CTCGTGCTCG GCTACGCGCT CGTCGTCGCA TGGCCGAACA TGCCGTCGCT CGACGCGCTG
ACCGACTATC GTCCGAAGAT ACCGCTGCGC ATCTACACGT CCGATCACGT GCTGATCGGC
GAATTCGGCG AGGAACGCCG CGACATCGTC CATTTCAAGG ACGTGCCGGA CTCGCTCAAG
AAGGCGATCC TCGCGATCGA GGACGCGCGC TTCTACGATC ACGGCGGCGT CGACCTTACC
GGCATCGCCC GCGCCGGCTT CGTCGCGCTG ACGAACGGCC ATGCGTCGCA GGGCGCGAGC
ACGATCACGA TGCAGGTCGC GCGCAACTTC TTCCTGTCGA GTGAAAAGAC CTACACACGC
AAGATCTACG AGATGCTGCT CGCGTACCGC ATCGAGCGCG CGCTGACGAA GGATCAGATT
CTCGAGGTCT ACATGAATCA GATCTATCTC GGCCAGCGTG CGTATGGCTT CGCGAGCGCC
GCGCGCGTGT ATTTCGGCAA GGACCTGAAG GACATCACGC TCGCGGAAGC GGCGATGCTC
GCGGGGCTGC CGAAGGCGCC GTCCGCGTAT AACCCGGTCG TCAATCCGAA GCGCGCGAAG
GTCCGCCAGG AATACATCCT GCAGCGGATG CTCGAGCTGA ACTTCATCAC GCGCGAGCAG
TACGACGAGG CTGTCGCGCA GCCGCTCGTC GTCAAGGGCG CGGGCCGCGA GTTCAGCGTA
CACGCCGAGT ACGTCGCGGA AATGGTCCGG CAGATGATGT ATGCGCAGTA CCGCGAGGAA
ACCTACACGC GCGGCTTCAA CGTCGTCACG ACGATCGATT CCGCCGACCA GCAGGTCGCG
TACACCGCGC TGCGCAAGGG CATCATGGAT TACGAGCGCC GCCACGGCTA TCGCGGGCCG
GAAGGCTTCA TCGAGCTGCC GGCCGGCGCC GACGACCGCG AACAGGCGAT CGACGACGCG
CTGCTCGAGC ATCCCGACAA CGGCGAACTG ATCGCGGCGG TCGTCACCGC GGCCACCCCG
CGCCAGATCA CGGTGGCCTT CATCGACGGC AGCACCGCGA CGATCGAAGG CGACAACCTG
CGCTTCGCGT CGAGCGCGCT GTCGGCCAAC GCGCAGCCGA ACCGCCGCAT CCGTCCGGGC
GCGATCGTCC GTGTCGTGAA GAACGACGCC GGCAAGTGGT CGATCACGCA ATTGCCGCAG
GTCGAGGGCG CGTTCATCTC GATCGTCCCG CAGGACGGCG CGATCCGCTC GCTCGTCGGC
GGCTTCGACT ACAACAAGAA CAAGTTCAAC CACGTCACGC AGGCGTGGCG GCAACCGGGT
TCGTCGTTCA AGCCGTTCAT CTACTCGGCG TCGCTCGACA AGGGCCTCGG GCCGGCCACC
GTGATCAACG ATGGCCCGCT GTATTTCAGC GCCGCGGAAA CCGGCGGCCA GCCGTGGGAA
CCGAAGAACT ACGGCGGCGG CTTCGAAGGT CCGATGTCGA TGCGCACCGC GCTGCAGCGC
TCGCGCAACC TCGTATCGAT CCGGATCCTG AACCACATCG GCACGAAGTA CGCGCAGCAG
TACATCACAC GCTTCGGCTT CGACGCCGAC CGCCATCCGG CCTACCTGCC GATGGCGCTC
GGTGCGGGCC AGGTCACGCC GCTGCAGATG GCCGGCGCGT ACTCGGTGTT CGCCAACGGC
GGCTTCCGCG TGAACCCGTA TCTGATCGCC GAAGTGACCG ATCCGAACGG CGCGATCGTC
GCCCGCGCGC AGCCGCTCAT CGCCGAGCAG AACGCGCCGC GCGCGATCGA CGCACGCAAC
GCATACGTGA CGAACAGCCT GCTGCAGAGC GTCGCGCAGC GCGGCACGGG CGCACGCACC
AACGTGCTGA AGCGCACCGA CCTCGCAGGC AAGACCGGTA CGACGAACGA CTCGCACGAC
GCGTGGTTCG CCGGCTACCA GCACACGCTC GCGGCGATCG CGTGGATCGG CTACGACAAC
CCGCGCAGCC TCGGCGATCG CGAAACCGGC GGTGGCCTGT CGTTGCCGGT CTGGATCGAA
TACATGGGTG CGGCGTTGAA GGGCGTGCCG GAGTTCAAGC CGACGATGCC GGACGACGTC
CAGTCGATCG GCGGCGAGCT GTACTTCACC GAGTTCACGC CGGGGCACGG CTTCGTGTCG
ACGGTCGGCG TGCCGCAGGC GCCGGCGGTG CAGGACACCG AGGAACCGGT GCCGCACGTC
GACGAGCAGG AAAAGCAGGA CATCATGAAC CTGTTCCGCG GCCACTGA
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| Protein sequence | MQSTSPTSPP PAPEPKKRPW WQKALIGVAA MCVALVVAGG LVLGYALVVA WPNMPSLDAL
TDYRPKIPLR IYTSDHVLIG EFGEERRDIV HFKDVPDSLK KAILAIEDAR FYDHGGVDLT
GIARAGFVAL TNGHASQGAS TITMQVARNF FLSSEKTYTR KIYEMLLAYR IERALTKDQI
LEVYMNQIYL GQRAYGFASA ARVYFGKDLK DITLAEAAML AGLPKAPSAY NPVVNPKRAK
VRQEYILQRM LELNFITREQ YDEAVAQPLV VKGAGREFSV HAEYVAEMVR QMMYAQYREE
TYTRGFNVVT TIDSADQQVA YTALRKGIMD YERRHGYRGP EGFIELPAGA DDREQAIDDA
LLEHPDNGEL IAAVVTAATP RQITVAFIDG STATIEGDNL RFASSALSAN AQPNRRIRPG
AIVRVVKNDA GKWSITQLPQ VEGAFISIVP QDGAIRSLVG GFDYNKNKFN HVTQAWRQPG
SSFKPFIYSA SLDKGLGPAT VINDGPLYFS AAETGGQPWE PKNYGGGFEG PMSMRTALQR
SRNLVSIRIL NHIGTKYAQQ YITRFGFDAD RHPAYLPMAL GAGQVTPLQM AGAYSVFANG
GFRVNPYLIA EVTDPNGAIV ARAQPLIAEQ NAPRAIDARN AYVTNSLLQS VAQRGTGART
NVLKRTDLAG KTGTTNDSHD AWFAGYQHTL AAIAWIGYDN PRSLGDRETG GGLSLPVWIE
YMGAALKGVP EFKPTMPDDV QSIGGELYFT EFTPGHGFVS TVGVPQAPAV QDTEEPVPHV
DEQEKQDIMN LFRGH
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