Gene BamMC406_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0312 
Symbol 
ID6178067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp352138 
End bp352827 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID641680057 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_001807029 
Protein GI172059377 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.440884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCTT CGACACTGGA GCCCGTGCGC GCGTCGGGCG CGCGCACGGC AGCCGCGGGT 
AGCTCCCGGG CCGGCGCCGT GCGTACGACG TCGCCGCGCT GGCTGGTGCC CGCCAAGGTG 
CTGGTTTTCG CGGCCGGCCT CTATCCGCTC GCGCGACTCG TGCTGTTCGG GCTGACCGAC 
CGGCTCGGTG CGAACCCGAT CGAATTCATC ACGCGTTCGA CGGGCCTCTG GACGCTGGTC 
ATGCTCTGCA TCACGCTCGC CATCACGCCG CTTCGGCACG TGACGAGCGT TCCGGCGTTG 
TTGCGTTTTC GCCGGATGAT CGGCCTGTTT GCGTTCTTTT ATGCGACGCT GCATTTCACG 
ACGTACCTGT GGTTCGACAA GTGGTTCGAC GTGCTCGCGA TCCTGAAGGA TGTCGGCAAG 
CGTCCGTTCA TCACGGTCGG CTTCGCTGCG TTCGTGCTGC TGATTCCGCT GGCCGCGACA 
TCGCCGCGTG CGATGGTGCG CCGGCTCGGC CGTCGCTGGG CTACGCTGCA TCGCGCGATC 
TATGCGATCG CGCTGTTCGG CGTGCTGCAT TTCTGGTGGA TGCGGGCCGG CAAGCACGAT 
CTCGCGCAGC CGAAGCTCTA CGCGACGATC GTCGCGGTGC TGCTCGGCTG GCGGCTGCTT 
GCATGGGGCT GGCGGCGCGT CCGTACCTGA
 
Protein sequence
MPPSTLEPVR ASGARTAAAG SSRAGAVRTT SPRWLVPAKV LVFAAGLYPL ARLVLFGLTD 
RLGANPIEFI TRSTGLWTLV MLCITLAITP LRHVTSVPAL LRFRRMIGLF AFFYATLHFT 
TYLWFDKWFD VLAILKDVGK RPFITVGFAA FVLLIPLAAT SPRAMVRRLG RRWATLHRAI 
YAIALFGVLH FWWMRAGKHD LAQPKLYATI VAVLLGWRLL AWGWRRVRT