Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0310 |
Symbol | |
ID | 6176133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 349773 |
End bp | 350963 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641680055 |
Product | cytochrome c-type biogenesis protein CcsB |
Protein accession | YP_001807027 |
Protein GI | 172059375 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.269517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCA CTCAAGTTTC CTCTTCCCGT TCGGGGCCCG CCCAAGCCTC GAATCCGGCG CCGTTGTTCG ACGACCGCCC GTTCCTCGCG CGCCTGTCGG TCATCGACTG GTTGTTCGCG CTGGCACTCG TGGTCGGCGC GGGCTATGCG TTCGTGCACT ACAACGAACA CATGAATTAC TACGACAAGG CGGTGATGAT CGGCACGGTG CCGGCGCTTG TCGTACTCGG CTGGCGCTGG AAGCCCGCGC GGCTGATGAT GGCGTCGATC GCGGTGCTGT CGCTGCTGTC GATCCAGATC TACCAGGGCG ATCTCGCGCG CGCCGATTCG GCGTTCTTCC TCAAGTATTT CCTGTCGAGC CAGTCCGCGA TCCTGTGGAT GAGCGCGCTA TTCGTGCTCG CGACGATCTT CTACTGGATC GGCTTGCTCG CACGTTCGGA GTCGGGCTCC GCGATTGGCC AGAAGCTCAC GTGGGTCGCC GTGCTGATGG GCTTCACCGG CCTGATGGTG CGCTGGTACG AGTCCTACCT CATCGGTGCC GACGTCGGGC ATATCCCCGT ATCGAACCTG TATGAAGTAT TCGTGCTGTT CAGCCTGATC ACCGCGCTGC TTTATCTGTA TTACGAAGGC CACTACGGCA CGCGCGCACT CGGCGCATTC GTGCTGCTCG TCATCAGCGC GGCTGTCGGC TTCCTGATGT GGTACTCGGT CGCGCGCGAT GCGCAGCAGA TCCAGCCGCT CGTGCCGGCG CTGCAGAGCT GGTGGATGAA GATCCACGTG CCGGCGAACT TCATCGGCTA CGGCAGCTTC GCGCTGTCGG CGATGGTGTC GGTCGCGTAC CTGATGAAAG AGCGCGGCGT GCTCGCCGAT CGCCTGCCGA CGCTCGAGGT GCTCGACGAC GTGATGTACA AGTCGATCGC GGTCGGCTTC GCGTTCTTCA CGATCGCGAC GATCCTCGGC GCGCTCTGGG CCGCCGAAGC ATGGGGCGGC TACTGGAGCT GGGACCCGAA GGAAACGTGG GCGCTTATCG TGTGGCTCAA CTACGCGGCC TGGCTGCACA TGCGGCTGAT GAAGGGCCTG CGCGGAGCGG TCGCCGCCTG GTGGGCGCTG ACGGGCCTGC TCGTGACGAC GTTCGCGTTC CTCGGCGTCA ACATGTTCCT GTCCGGGCTG CACAGCTACG GCAAGCTGTA A
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Protein sequence | MDLTQVSSSR SGPAQASNPA PLFDDRPFLA RLSVIDWLFA LALVVGAGYA FVHYNEHMNY YDKAVMIGTV PALVVLGWRW KPARLMMASI AVLSLLSIQI YQGDLARADS AFFLKYFLSS QSAILWMSAL FVLATIFYWI GLLARSESGS AIGQKLTWVA VLMGFTGLMV RWYESYLIGA DVGHIPVSNL YEVFVLFSLI TALLYLYYEG HYGTRALGAF VLLVISAAVG FLMWYSVARD AQQIQPLVPA LQSWWMKIHV PANFIGYGSF ALSAMVSVAY LMKERGVLAD RLPTLEVLDD VMYKSIAVGF AFFTIATILG ALWAAEAWGG YWSWDPKETW ALIVWLNYAA WLHMRLMKGL RGAVAAWWAL TGLLVTTFAF LGVNMFLSGL HSYGKL
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