| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0296 |
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| Symbol | secY |
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| ID | 6177513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 337210 |
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| End bp | 338487 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641680041 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001807013 |
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| Protein GI | 172059361 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000308109 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0856624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCTGC TCCTGGCGCT GATCGTCTAT CGCATCGGCG CGCACATCCC CGTGCCGGGC
ATCGATCCGG ATCAACTGGC GAAGCTGTTC CAGAGCCAGG CGGGCGGCAT CCTGGGCATG
TTCAACATGT TCTCGGGTGG TGCGCTTTCC CGCTTCACGA TCTTTGCGCT GGGGATCATG
CCGTACATCT CGGCGTCGAT CATCATGCAG TTGCTGGCGA TCGTCTCGCC GCAGCTCGAG
GCGCTGAAGA AGGAAGGGCA GGCAGGGCAA CGGAAGATCA CGCAGTACAC GCGGTATTTC
ACCGTGGTGC TCGCGACCTT CCAGGCGTTC GGTATCGCGG CTGCGCTGGA AAACCAGCCT
GGCCTCGTGA TCGACCCCGG CATGCTGTTC CGACTGACGA CGGTTGTGAC GTTGGTTACC
GGCACGATGT TCCTGATGTG GCTGGGTGAG CAGATCACCG AGCGTGGTCT GGGCAACGGC
ATCTCGATCA TCATCTTCGG CGGGATCGCA GCAGGGTTCC CGAATGCCGT CGGTGGGCTG
TTCGAGCTGG TGCGTACGGG TTCGATGAGC ATCATTTCGG CGATCATCAT CGTCGTTCTG
ATTGCCGCGG TGACTTACCT GGTCGTGTTC ATCGAACGCG GTCAGCGCAA GATCCTCGTG
AACTACGCGA AGCGCCAGGT CGGCAACAAG ATCTACGGTG GACAGTCGTC GCACTTGCCG
CTGAAGCTGA ACATGTCGGG CGTGATTCCG CCGATCTTCG CATCGTCGAT CATCCTGTTT
CCGGCCACGA TTCTCGGCTG GTTCAGCACG GGTCAGCCGA CGGGGAGCTG GATCTCCAAC
ACGTTGCATA ACGTCGCGGA GGCGCTGAAA CCGGGTCAGC CGGTCTATGT GCTGCTGTAC
ACGCTGGCAA TCGTGTTTTT CTGCTTTTTC TACACCGCAC TGGTGTTCAA CAGCAGGGAA
ACCGCGGACA ACCTGAAGAA GAGCGGCGCG TTTGTTCCGG GTATTCGTCC GGGCGATCAG
ACCGCACGAT ACATCGACCG CATCCTCACG CGTCTGACGC TGGCTGGTGC GATCTACATC
GTCTTCGTGT GTCTGCTGCC GGAATTCCTG GTGCTGCGCT GGAACGTGCC GTTTTATTTT
GGTGGAACGT CGCTGCTGAT CATTGTCGTC GTCACGATGG ACTTCATGGC GCAGGTGCAG
TCGTACGTTA TGTCGCAACA GTATGAGTCG CTGCTCAAGA AGGCAAACTT CAAGGGCGGC
AACATCCCAA TGCGTTAA
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| Protein sequence | MFLLLALIVY RIGAHIPVPG IDPDQLAKLF QSQAGGILGM FNMFSGGALS RFTIFALGIM
PYISASIIMQ LLAIVSPQLE ALKKEGQAGQ RKITQYTRYF TVVLATFQAF GIAAALENQP
GLVIDPGMLF RLTTVVTLVT GTMFLMWLGE QITERGLGNG ISIIIFGGIA AGFPNAVGGL
FELVRTGSMS IISAIIIVVL IAAVTYLVVF IERGQRKILV NYAKRQVGNK IYGGQSSHLP
LKLNMSGVIP PIFASSIILF PATILGWFST GQPTGSWISN TLHNVAEALK PGQPVYVLLY
TLAIVFFCFF YTALVFNSRE TADNLKKSGA FVPGIRPGDQ TARYIDRILT RLTLAGAIYI
VFVCLLPEFL VLRWNVPFYF GGTSLLIIVV VTMDFMAQVQ SYVMSQQYES LLKKANFKGG
NIPMR
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