Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0293 |
Symbol | rpsE |
ID | 6176761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 335918 |
End bp | 336436 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641680038 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001807010 |
Protein GI | 172059358 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000423701 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0414454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA TGCAAGCGAA AGTTCAGGCT GACGAGCGCG ACGACGGCCT TCGCGAAAAG ATGATTTCGG TCAACCGCGT GACCAAGGTC GTGAAGGGTG GCCGTATTCT CGGCTTCGCC GCACTGACCG TGGTTGGCGA CGGCGATGGC CGCATCGGTA TGGGCAAGGG CAAGGCGAAG GAAGTGCCGG TCGCTGTCCA GAAGGCAATG GAACAAGCTC GCCGCAACAT GTTCAAGGTG CCGCTCAAGA ACGGCACGCT GCAGCACGAA GTGCACGGCA AGCATGGCGC ATCCGCTGTC CTCCTCGCTC CGGCGAAGGC AGGTACGGGT GTGATCGCCG GCGGCCCGAT GCGCGCAGTG TTCGACGTGA TGGGCGTTCA GAACGTCGTG GCGAAGAGCC ACGGTTCGAC GAACCCGTAC AACCTCGTTC GCGCCACGCT GGACGGTCTG CGCAAGCAGT CGACCCCGGC AGACATCGCG GCGAAGCGCG GCAAGTCCGT CGAAGATATT TTGGGCTAA
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Protein sequence | MAKMQAKVQA DERDDGLREK MISVNRVTKV VKGGRILGFA ALTVVGDGDG RIGMGKGKAK EVPVAVQKAM EQARRNMFKV PLKNGTLQHE VHGKHGASAV LLAPAKAGTG VIAGGPMRAV FDVMGVQNVV AKSHGSTNPY NLVRATLDGL RKQSTPADIA AKRGKSVEDI LG
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