| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0290 |
|---|
| Symbol | rpsH |
|---|
| ID | 6177566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 334581 |
|---|
| End bp | 334976 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641680035 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_001807007 |
|---|
| Protein GI | 172059355 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000392794 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0211044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGA GTGATCCTAT CGCCGATATG CTGACTCGCA TCCGCAACGC GCAGATGGTC
GAGAAGGTAT CGGTCGCGAT GCCCTCGTCG AAGGTCAAGG TTGCAATCGC GCAAGTCCTG
AAGGACGAAG GCTATATCGA CGATTTCGCC GTCAAGGCGG AAGGTGCGAA GTCCGAACTG
AATATCGCGC TGAAGTACTA CGCAGGTCGC CCGGTCATCG AACGCCTCGA GCGCGTGTCG
AAGCCTGGTC TGCGCGTGTA CCGCGGCCGC AACGACATTC CCCAGGTCAT GAACGGCCTG
GGCGTGGCAA TCGTGTCGAC GCCGAAGGGC GTGATGACCG ACCGCAAGGC GCGCGCTACC
GGCGTCGGCG GCGAAGTCAT CTGCTACGTC GCTTAA
|
|---|
| Protein sequence | MSMSDPIADM LTRIRNAQMV EKVSVAMPSS KVKVAIAQVL KDEGYIDDFA VKAEGAKSEL
NIALKYYAGR PVIERLERVS KPGLRVYRGR NDIPQVMNGL GVAIVSTPKG VMTDRKARAT
GVGGEVICYV A
|
|---|
| |