| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0288 |
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| Symbol | rplE |
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| ID | 6177657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 333714 |
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| End bp | 334253 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641680033 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001807005 |
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| Protein GI | 172059353 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000152111 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.01295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT TTCAAGAGTT TTACAAAGAA AAGGTTGTGC CCGGCCTGAT CGAGAAGTTC
GGTTACAAGT CGGTCATGGA AGTGCCGCGC ATCACCAAGA TCACGCTGAA CATGGGTCTT
GGCGAAGCGA TCGCTGACAA GAAGATCATC GAGAACGCCG TTGGCGACCT CACGAAGATC
GCCGGCCAGA AGCCGGTCGT CACGAAGGCA CGCAAGGCAA TCGCAGGCTT CAAGATCCGC
CAGGGCTATC CGATTGGCGC GATGGTGACG CTGCGCGGCC GTGCGATGTA CGAATTCCTC
GACCGTTTCG TGACCGTCGC CCTGCCCCGC GTGCGTGACT TCCGCGGCGT GTCGGGTCGT
GCTTTCGATG GCCGTGGCAA CTACAACATC GGTGTGAAAG AGCAGATCAT TTTCCCCGAA
ATCGACTACG ACAAGATCGA CGCACTGCGT GGGCTGAACA TCAGCATCAC GACGACTGCG
AAGACCGACG ACGAAGCAAA GGCTCTGCTC GCCAGCTTCA AGTTCCCGTT CAGAAACTGA
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| Protein sequence | MARFQEFYKE KVVPGLIEKF GYKSVMEVPR ITKITLNMGL GEAIADKKII ENAVGDLTKI
AGQKPVVTKA RKAIAGFKIR QGYPIGAMVT LRGRAMYEFL DRFVTVALPR VRDFRGVSGR
AFDGRGNYNI GVKEQIIFPE IDYDKIDALR GLNISITTTA KTDDEAKALL ASFKFPFRN
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