| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0283 |
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| Symbol | rplP |
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| ID | 6177132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 331811 |
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| End bp | 332227 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641680028 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_001807000 |
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| Protein GI | 172059348 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000045602 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0248702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCAAC CGAAACGCAG AAAGTATCGT AAAGAGCAGA AGGGTCGTAA CACCGGCAAG
GCGACGCGCG GCAACGCAGT GTCGTTCGGT GATTTCGGCC TGAAGGCGAT CGGTCGCGGT
CGTTTGACCG CACGTCAAAT TGAAGCGGCG CGTCGTGCAA TGACGCGTCA CATCAAGCGT
GGCGGTCGTA TCTGGATCCG GATCTTCCCG GACAAGCCGA TTTCGCAGAA GCCGGCCGAA
GTGCGTATGG GTAACGGTAA GGGTAACCCG GAGTACTACG TCGCCGAGAT CCAGCCGGGC
AAGATGCTCT ATGAAATGGA CGGCGTAACC GAAGAACTGG CACGCGAAGC GTTCCGTCTG
GCTGCAGCCA AGCTGCCGCT GAAGACGGCA TTCATCGTGC GCCAGCTCGG CGCCTAA
|
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| Protein sequence | MLQPKRRKYR KEQKGRNTGK ATRGNAVSFG DFGLKAIGRG RLTARQIEAA RRAMTRHIKR
GGRIWIRIFP DKPISQKPAE VRMGNGKGNP EYYVAEIQPG KMLYEMDGVT EELAREAFRL
AAAKLPLKTA FIVRQLGA
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