| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0282 |
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| Symbol | rpsC |
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| ID | 6178022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 331008 |
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| End bp | 331808 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641680027 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001806999 |
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| Protein GI | 172059347 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000274054 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0275687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGA AAATTCATCC GACTGGCTTC CGCCTGGCTG TCAGCCGCAA TTGGGCTTCG
CGTTGGTACG CGAACAACAA CAATTTCGCG GCGATGCTGC AGGAAGACAT CGGTGTTCGT
GAGTACCTGA AGAAGAAGCT GAAGAACGCT TCGGTCGGTC GGGTCGTCAT CGAGCGTCCG
GCAAAGAACG CGCGCATCAC GATTTACAGC TCGCGTCCGG GCGTCGTCAT CGGCAAGAAG
GGCGAGGATA TCGAACAGCT GAAGACGGAA CTGCAACGCC GCATGGGCGT GCCGGTTCAC
GTCAACATCG AAGAGATCCG CAAGCCGGAA ACCGATGCGC AACTGATCGC TGACTCGATC
ACGCAACAGC TCGAGCGCCG GATCATGTTC CGTCGCGCGA TGAAGCGTGC GATGCAGAAC
GCGATGCGTC TGGGTGCCCA AGGCATCAAG ATCATGAGCG CAGGCCGTCT GAACGGTATC
GAAATCGCTC GTACGGAGTG GTATCGCGAA GGTCGCGTGC CGCTTCACAC GCTGCGTGCC
GATATCGACT ACGCGACTTC GGAAGCGAAG ACGACCTACG GCATCATCGG TGTCAAGGTG
TGGGTATACA AGGGCGACAC GCTCGGCCGC AACGATGCGC CGGTGGTCGA AGAAGTAGCC
GAAGACAAGC GTCCGCGTCG CAATGCGCGT CCGGGCGACC GTCGTCCGCG CCGTGACGGC
GAAGGCGGCG CTCCGGGTGC TCGCCGTGGC GCACCGCGCC GTGGCGCCGG CAAGCCCGAA
GACGGCAAGA CTGGAGAATA A
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| Protein sequence | MGQKIHPTGF RLAVSRNWAS RWYANNNNFA AMLQEDIGVR EYLKKKLKNA SVGRVVIERP
AKNARITIYS SRPGVVIGKK GEDIEQLKTE LQRRMGVPVH VNIEEIRKPE TDAQLIADSI
TQQLERRIMF RRAMKRAMQN AMRLGAQGIK IMSAGRLNGI EIARTEWYRE GRVPLHTLRA
DIDYATSEAK TTYGIIGVKV WVYKGDTLGR NDAPVVEEVA EDKRPRRNAR PGDRRPRRDG
EGGAPGARRG APRRGAGKPE DGKTGE
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