| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0281 |
|---|
| Symbol | rplV |
|---|
| ID | 6177607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 330667 |
|---|
| End bp | 330996 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641680026 |
|---|
| Product | 50S ribosomal protein L22 |
|---|
| Protein accession | YP_001806998 |
|---|
| Protein GI | 172059346 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000617614 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0696934 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTGA AAGCAATTCA TCGCGGTGCC CGCATCTCGG CGCAAAAAAC GCGCCTTGTG
GCTGACCAGA TCCGCGGTTT GCCGGTCGAC AAGGCGCTGA ACGTCCTGAC GTTCTCGCCG
AAGAAGGCGG CTGGCATCGT GAAGAAGGTT GTGCTGTCGG CAATCGCGAA TGCGGAGCAC
AACGAAGGCG CTGATATCGA CGAGCTCAAG ATCAAGAGCA TCTACGTCGA CAAGGCTGCA
TCGCTCAAGC GTTTCACCGC GCGCGCCAAG GGCCGCGGTA ACCGCATCGA GAAGCAATCC
TGTCACATCA CTGTGACGGT CGGGAATTAA
|
|---|
| Protein sequence | MEVKAIHRGA RISAQKTRLV ADQIRGLPVD KALNVLTFSP KKAAGIVKKV VLSAIANAEH
NEGADIDELK IKSIYVDKAA SLKRFTARAK GRGNRIEKQS CHITVTVGN
|
|---|
| |