| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0279 |
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| Symbol | rplB |
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| ID | 6177494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 329541 |
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| End bp | 330368 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641680024 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_001806996 |
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| Protein GI | 172059344 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000585498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0839884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG TGAAAGTTAA ACCGACTTCG CCGGGTCGCC GCGCGATGGT CAAGGTGGTC
AACAAGAATC TGCACCAGGG CAAGCCGTTC GCGGCACTGC TCGACTCGCA GAGCTCGACC
GCCGGCCGTA ACAACAACGG CCGTATCACC ACGCGTCACA AGGGTGGTGG TCACAAGCAG
CACTATCGTA TCGTCGATTT CCGTCGCACG AAGGATGGCA TCCCGGCAAA GGTCGAGCGT
CTCGAGTACG ACCCGAACCG TAGCGCGAAC ATCGCGCTGG TGCTCTACGC AGACGGCGAG
CGTCGCTACA TCATCGCCCC GAAGGGCCTG ACCGTCGGCC AACAGCTGAT GTCGGGTTCG
GAAGCGCCGA TCCGTGCAGG CAACACGCTG CCGATCCGCA ACATTCCGGT CGGTACGACG
ATCCACTGCA TCGAGATGCT GCCGGGCAAG GGCGCGCAAA TGGCGCGTTC GGCTGGCACG
TCGGCCATGC TGCTGGCACG CGAAGGCGTC TACGCGCAGG TTCGTCTGCG TTCGGGCGAA
ATCCGCCGCG TGCACATCGA GTGCCGTGCA ACGATCGGTG AAGTCGGCAA CGAAGAGCAT
AGCCTGCGCC AGATCGGCAA GGCTGGCGCG AACCGCTGGC GCGGTATCCG CCCGACGGTG
CGTGGCGTTG CGATGAACCC GGTTGATCAC CCGCACGGTG GTGGTGAGGG CAAGACGGCT
GCAGGTCGCG ACCCGGTGAG CCCGTGGGGT ACGCCGGCTA AGGGTTATCG CACCCGCAGC
AACAAGCGCA CGACGACGAT GATCGTTCAG CGCCGTCACA AGCGTTAA
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| Protein sequence | MAIVKVKPTS PGRRAMVKVV NKNLHQGKPF AALLDSQSST AGRNNNGRIT TRHKGGGHKQ
HYRIVDFRRT KDGIPAKVER LEYDPNRSAN IALVLYADGE RRYIIAPKGL TVGQQLMSGS
EAPIRAGNTL PIRNIPVGTT IHCIEMLPGK GAQMARSAGT SAMLLAREGV YAQVRLRSGE
IRRVHIECRA TIGEVGNEEH SLRQIGKAGA NRWRGIRPTV RGVAMNPVDH PHGGGEGKTA
AGRDPVSPWG TPAKGYRTRS NKRTTTMIVQ RRHKR
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