| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0275 |
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| Symbol | rpsJ |
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| ID | 6177977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 327468 |
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| End bp | 327779 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641680020 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001806992 |
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| Protein GI | 172059340 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000312385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.114579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCAAC AGAAAATCCG CATTCGCCTG AAGGCTTTCG ACTACCGTTT GATCGATCAA
TCGGCTGCCG AGATCGTCGA TACCGCGAAG CGGACTGGTG CAATCGTCCG CGGCCCGGTG
CCGCTGCCGA CGCGCATCCA GCGTTTTGAC ATCCTGCGTT CGCCGCACGT CAACAAGACG
TCGCGCGATC AGCTCGAAAT CCGTACCCAC CAGCGCCTGA TGGACATCGT CGATCCGACC
GACAAGACGG TTGACGCGCT GATGAAGCTC GATCTGCCGG CTGGCGTCGA CGTGGAAATC
AAGCTGCAGT AA
|
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| Protein sequence | MQQQKIRIRL KAFDYRLIDQ SAAEIVDTAK RTGAIVRGPV PLPTRIQRFD ILRSPHVNKT
SRDQLEIRTH QRLMDIVDPT DKTVDALMKL DLPAGVDVEI KLQ
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