Gene BamMC406_0263 details

Gene Information

• Locus tag: BamMC406_0263
• Symbol: nusG
• ID: 6176225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria MC40-6
• Kingdom: Bacteria
• Replicon accession: NC_010551
• Strand: +
• Start bp: 308567
• End bp: 309124
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641680008
• Product: transcription antitermination protein NusG
• Protein accession: YP_001806980
• Protein GI: 172059328
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR00922] transcription termination/antitermination factor NusG

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00191516
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.632034
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGATA CTCCGGCATC CCCGAGCGGA AAGCGTTGGT ACGTCGTGCA CGCCTACTCC 
GGTATGGAGA AGAGCGTGCA GCGCGCGCTT CAAGAGCGCA TCGAACGTGC TGGCATGCAG 
GACAAATTCG GCCAGATCCT GGTTCCGACC GAAGAAGTGG TCGAAGTCAA AGGCGGCCAC 
AAGGCAGTGA CCGAGCGTCG TTTCTTCCCC GGCTACGTGT TGGTGGAAAT GGAAATGACG 
GACGAAACGT GGCACCTCGT GAAGAATACG GCGAAGGTCA CCGGTTTCGT CGGCGGTGCG 
CGTAACCGCC CGACTCCGAT TTCCCCGAAG GAAGTCGAAA AGATCATGTC GCAGATGCAG 
GAAGGCGTCG AGAAGCCGCG CCCGAAGACC CTGTTCGAAG TTGGCGAGAT GGTGCGTGTC 
AAGGAAGGCC CGTTCACGGA CTTCAACGGC ACGGTCGAAG AAGTCAACTA CGAAAAATCG 
CGCGTGCGTG TGTCGGTCAC CATCTTTGGC CGCTCCACCC CGGTCGAACT CGAGTTCGGT 
CAGGTCGAAA AAGTTTGA 

 

Protein sequence

MSDTPASPSG KRWYVVHAYS GMEKSVQRAL QERIERAGMQ DKFGQILVPT EEVVEVKGGH 
KAVTERRFFP GYVLVEMEMT DETWHLVKNT AKVTGFVGGA RNRPTPISPK EVEKIMSQMQ 
EGVEKPRPKT LFEVGEMVRV KEGPFTDFNG TVEEVNYEKS RVRVSVTIFG RSTPVELEFG 
QVEKV