| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0262 |
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| Symbol | secE |
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| ID | 6176289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 308185 |
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| End bp | 308565 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641680007 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_001806979 |
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| Protein GI | 172059327 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000233394 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.439523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAATC CATCCGTCGA AACTGTAAAT ACCTCCGGCG ATAAGCTGAT GCTGGCCCTG
GGCGTATTGT TGGTCTTGGC CGGATTCGTG GGCTTCTTCT GGCTGGCCAA CCAGCAGTGG
TATGTCCGCG GTGCCGCATT GGCGGTAGGT ATCATCGCCG GCGTGGCCGT CGGTCTGATG
TCCGCGCCCG GCAAGGGCCT TATCGCGTTT GCCAAGGATT CGTACAAGGA AGTCCGCAAG
GTCGTTTGGC CGACCCGCAA GGAAGCAACG CAAACCACGC TCGTCGTGTT CGGCTTCGTG
CTCGTGATGG CGATTTTTCT CTGGTTGAGC GACAAATCGA TCGAGTGGGT GATTTTCTCG
GCGATTCTGG GATGGAAATG A
|
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| Protein sequence | MANPSVETVN TSGDKLMLAL GVLLVLAGFV GFFWLANQQW YVRGAALAVG IIAGVAVGLM
SAPGKGLIAF AKDSYKEVRK VVWPTRKEAT QTTLVVFGFV LVMAIFLWLS DKSIEWVIFS
AILGWK
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