Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0261 |
Symbol | |
ID | 6178023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 306816 |
End bp | 308006 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641680005 |
Product | elongation factor Tu |
Protein accession | YP_001806978 |
Protein GI | 172059326 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000273962 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.384792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAAGG AAAAGTTTGA GCGGACCAAG CCGCACGTCA ACGTTGGAAC GATCGGTCAC GTTGACCACG GCAAGACGAC GCTGACGGCA GCGATCACGA CGGTGCTGAC GAAGAAGTTC GGCGGCGAAG CGAAGGCCTA CGACCAGATC GACGCGGCAC CGGAAGAAAA GGCGCGCGGC ATCACGATCA ACACGGCACA CGTCGAGTAC GAAACGGCTA ACCGCCACTA CGCACACGTC GACTGCCCGG GCCACGCTGA CTATGTGAAG AACATGATCA CGGGCGCAGC GCAGATGGAC GGCGCGATCC TGGTTTGCTC GGCAGCAGAC GGCCCGATGC CGCAAACGCG TGAGCACATC CTGCTGGCGC GTCAGGTTGG CGTTCCGTAC ATCATCGTGT TCCTGAACAA GTGCGACATG GTGGACGACG CTGAACTGCT CGAGCTGGTC GAGATGGAAG TTCGCGAACT CCTGTCGAAG TACGACTTCC CGGGCGACGA CACGCCGATC GTGAAGGGTT CGGCGAAGCT GGCGCTGGAA GGCGACACGG GCGAGCTGGG CGAAGTGGCG ATCATGAGCC TGGCAGACGC ACTGGACACG TACATCCCGA CGCCGGAGCG TGCAGTTGAC GGCGCGTTCC TGATGCCGGT GGAAGACGTG TTCTCGATCT CGGGCCGCGG TACGGTGGTG ACGGGTCGTG TCGAGCGCGG CATCGTGAAG GTCGGCGAAG AAATCGAAAT CGTCGGTATC AAGCCGACGG TGAAGACGAC CTGCACGGGC GTTGAAATGT TCCGCAAGCT GCTGGACCAA GGTCAGGCAG GCGACAACGT CGGTATCCTG CTGCGCGGCA CGAAGCGTGA AGACGTGGAG CGTGGCCAGG TTCTGGCGAA GCCGGGTTCG ATCACGCCGC ACACGCACTT CACGGCTGAA GTGTACGTGC TGAGCAAGGA CGAAGGCGGC CGTCACACGC CGTTCTTCAA CAACTACCGT CCGCAGTTCT ACTTCCGTAC GACGGACGTG ACGGGCTCGA TCGAGCTGCC GAAGGACAAG GAAATGGTGA TGCCGGGCGA CAACGTGTCG ATCACGGTGA AGCTGATCGC TCCGATCGCG ATGGAAGAAG GTCTGCGCTT CGCAATCCGC GAAGGTGGCC GTACCGTCGG CGCCGGCGTC GTCGCCAAGA TCATCGAGTA A
|
Protein sequence | MAKEKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLTKKF GGEAKAYDQI DAAPEEKARG ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLSK YDFPGDDTPI VKGSAKLALE GDTGELGEVA IMSLADALDT YIPTPERAVD GAFLMPVEDV FSISGRGTVV TGRVERGIVK VGEEIEIVGI KPTVKTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVE RGQVLAKPGS ITPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPKDK EMVMPGDNVS ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE
|
| |