| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0258 |
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| Symbol | paaA |
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| ID | 6177720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 295871 |
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| End bp | 296869 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641679994 |
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| Product | phenylacetate-CoA oxygenase subunit PaaA |
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| Protein accession | YP_001806975 |
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| Protein GI | 172059323 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3396] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02156] phenylacetate-CoA oxygenase, PaaG subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00110621 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0541025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACGC AATCCCTCGA CATCCCCGGC AACGTCGCGC CGCTCGACGC CACAGCCGAG
TCGCCCGAGC AGGCGCGGTT CGACGCGGTC ATGGCCGCGG ACGGCAAGAT CGAACCGCAG
GACTGGATGC CCGACGCCTA TCGCAAGACG CTGGTCCGCC AGATCTCGCA GCATGCGCAC
TCGGAAGTGG TCGGCATGCT GCCGGAAGGC AACTGGATCT CGCGCGCGCC GAGCCTGAAG
CGCAAGGCGA TCCTGCTCGC GAAAGTCCAG GACGAAGCCG GCCACGGCCT CTATCTATAT
AGCGCGGCCG AAACGCTCGG CGTATCGCGC GATTCGCTGA TCGACGCGCT GCACGCCGGC
AAGGCGAAAT ACTCGAGCAT CTTCAACTAC CCGACGCCGA CCTGGGCCGA CGTCGGCGTG
ATCGGCTGGC TCGTCGACGG CGCCGCGATC ATGAATCAGA TCCCGCTGTG CCGCTGCACG
TACGGCCCGT ACGCGCGCGC GATGATCCGC GTGTGCAAGG AAGAGTCGTT CCACCAGCGC
CAGGGTTTCG ATGCGCTGAT GTCGATGATG AAGGGCACCG ACGCGCAGCG CGCGATGGTC
CAGCAGGCCG TGAACCGCTG GTGGTGGCCG GTGCTGATGA TGTTCGGCCC GAGCGACGCC
GATTCTGTCC ACAGCAGCCA GTCGGCGAAA TGGGGCATCA AGCGGATCTC GAACGACGAC
CTGCGGCAGA AGTTCGTCGA CGCGACGGTC GACCAGGCGA AGGTCCTCGG CGTGACGCTG
CCCGACCCGG ACCTGAAATG GAACGACGCG CGCGGCCACC ACGACTACGG CGCGATCGAC
TGGGATGAAT TCTGGCGCGT CGTCAACGGC GACGGCCCTT GCAACAAGGA ACGCCTCGCG
ACCCGCGTGA AGGCGCACGA CGACGGCGCG TGGGTACGCG AAGCCGCACT CGCGCACGAA
GCGAAGCGCC GCGCCCGCGC CGAACAGCAC GCCGCCTGA
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| Protein sequence | MYTQSLDIPG NVAPLDATAE SPEQARFDAV MAADGKIEPQ DWMPDAYRKT LVRQISQHAH
SEVVGMLPEG NWISRAPSLK RKAILLAKVQ DEAGHGLYLY SAAETLGVSR DSLIDALHAG
KAKYSSIFNY PTPTWADVGV IGWLVDGAAI MNQIPLCRCT YGPYARAMIR VCKEESFHQR
QGFDALMSMM KGTDAQRAMV QQAVNRWWWP VLMMFGPSDA DSVHSSQSAK WGIKRISNDD
LRQKFVDATV DQAKVLGVTL PDPDLKWNDA RGHHDYGAID WDEFWRVVNG DGPCNKERLA
TRVKAHDDGA WVREAALAHE AKRRARAEQH AA
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