| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0257 |
|---|
| Symbol | paaB |
|---|
| ID | 6177917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 295550 |
|---|
| End bp | 295834 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641679993 |
|---|
| Product | phenylacetate-CoA oxygenase subunit PaaB |
|---|
| Protein accession | YP_001806974 |
|---|
| Protein GI | 172059322 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3460] Uncharacterized enzyme of phenylacetate metabolism |
|---|
| TIGRFAM ID | [TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00068602 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0451775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGG AATGGCCGAT CTGGGAAGTG TTCGTGCGCA GCAAGCAGGG GCTCGACCAC
AAGCATTGCG GCAGCCTGCA CGCGTCCGAC GCGTCGATGG CGCTGCGCAT GGCGCGCGAC
GTCTACACGC GCCGCCAGGA AGGCGTGAGC ATCTGGGTGG TGCCGTCGTC GGCGATCACC
GCGTCGGATC CGGCCGAGAA GGCCGAGCTG TTCGAACCGG CGGGCGACAA GATCTACCGT
CACCCGACGT TCTACACGCT GCCCGACGAA GTCAACCACA TGTAA
|
|---|
| Protein sequence | MNKEWPIWEV FVRSKQGLDH KHCGSLHASD ASMALRMARD VYTRRQEGVS IWVVPSSAIT
ASDPAEKAEL FEPAGDKIYR HPTFYTLPDE VNHM
|
|---|
| |